Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07612 ATGGAGTGGGTCGTTGGCGGAAAGTTTAAGATTGGTCGCAAAATCGGTAGCGGTTCATTTGGTGAAATTTATATAGCCTCTGATATGGATACCTCTGAGGTCGTTGCCGTCAAAATGGAGAAGAAGAGAACAAGGCATCCACAACTATTGTATGAGGCCAAATTATACAGTCTTCTTCAAGGAGAAAGTGGTATTCCAAGTATGAGATGGTGTGGTACTGATGGAGATCATAATATTCTGGTTATGGATCTTCTGGGACGTAGTCTGGAGGACCTTTTTGTCTTTTGCGGGAGCAAGTTTACCTTAAAAACAGTTTTGATGTTGGCAGACCAGATGCTTTCGAGAATAGAGTACATGCATTCCAAGGGATTTTTACATAGAGACATCAAACCAGACAACTTTCTAATGGGTATTAGGAGAAAATCAAGTCAGGTTTATATTATTGATTTTGGACTAGGAAAAAGATATCGGGACCCCAAAACAAGCAAGCATATTCCTTATAGAGAGAATAAAAGTTTAACAGGGACAGCACGATATGCAAGTTGCAATACTCACCTAGGAATCGAGCAAAGTCGTCGTGATGATTTGGAGTCTATTGGCTATGTCCTTATGTACTTCTTAAGAGGAAGCCTTCCTTGGCAAGGTCTGAAAGCTGTCACCAAAGAGGAAAAATATGACAAGATTCGTGAGAAGAAGTTATCAACTTCCACTGAGAAGCTTTGCGAATCATATCCTGTGGAGTTTGCGTCTTACTTTCATTATTGCCACTCTTTGACATTTGAGCAAGATCCAGATTATGGATTCTTAAAGCGTCTGTTTCGTGAGTTGTTCACTCGTGAAGGATATGACTATGACAATTTATTCGACTGGACCATCCTAAAATACCAGCAGACACAACAGACAAGGAGACAAAAACAATCATCGCCTTCAGATGCCGTACCTAGTGCTGTGCCTAGCAGTCTACAACCAGTGGTTGTGGAAAAACATACAGGAATCAATAATTCACCTCAAGTTACTGTAACAAAACTGCTAACCAATCTTGATCGTCCAAATGTGCGTGTGCAGCCTAAGCCATCCAATCATAAGAATCTTAATGCCAAGAATCATACCGGAAAACATAATGTGAACAACGATCCATCCACTTCATCCGCTTTGCCCAAATCGACTGCAGAAAATGTCTCCAAGCCTGAAAGGCCCACAGGAACTTCAAACCTAGGCCGTGTATTTGGGAATAACTCCCATATTTCAAGCAGCTGGATTCCTTCTTTACGGCGAATTTCTTCTGCCAAATAG 1293 0.4114 MEWVVGGKFKIGRKIGSGSFGEIYIASDMDTSEVVAVKMEKKRTRHPQLLYEAKLYSLLQGESGIPSMRWCGTDGDHNILVMDLLGRSLEDLFVFCGSKFTLKTVLMLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYIIDFGLGKRYRDPKTSKHIPYRENKSLTGTARYASCNTHLGIEQSRRDDLESIGYVLMYFLRGSLPWQGLKAVTKEEKYDKIREKKLSTSTEKLCESYPVEFASYFHYCHSLTFEQDPDYGFLKRLFRELFTREGYDYDNLFDWTILKYQQTQQTRRQKQSSPSDAVPSAVPSSLQPVVVEKHTGINNSPQVTVTKLLTNLDRPNVRVQPKPSNHKNLNAKNHTGKHNVNNDPSTSSALPKSTAENVSKPERPTGTSNLGRVFGNNSHISSSWIPSLRRISSAK 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07612 430 PANTHER CASEIN KINASE-RELATED 9 357 - -
Mepo3g07612 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo3g07612 430 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mepo3g07612 430 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mepo3g07612 430 SMART serkin_6 9 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07612 430 MobiDBLite consensus disorder prediction 344 430 - -
Mepo3g07612 430 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07612 430 FunFam CK1 family protein kinase 1 324 - -
Mepo3g07612 430 Gene3D Transferase(Phosphotransferase) domain 1 1 330 - -
Mepo3g07612 430 ProSiteProfiles Protein kinase domain profile. 9 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07612 Mepo-Chr3 89437480 89443440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07612 8 213 MAP Kinase Kinase Kinase AT1G54960 28.440 2.81e-15 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mepo3g07612 Pkinase 7.9e-29 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07612 3 89437480 89443440 Mepo4g00896 4 11588498 11593213 PCT