Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07600 ATGGAGAAGAGCGAAACGACGCTGGATTTAGCTAATCGGAAATTTGCGCGGCAATTGGATTTCGCTGCCGCATGTGGAGCTCCGTCGTACCTGACATTGTCGCCACCGACGCCGCAGTCCCTGTCACAAACCATTCCACGACCACCGGCGCCGTCGCATTTGCCTCCTCCGGTGCAAATGCATTTGGATTTTCAGTCACCAGTGAGACGGCCGTGGAAACAATCACCACCACAGTGGCAGCAGCAGAGAACGTCACAGTCTCCGCCGGTGATGCCGCATTTTCAATCACCGCGACCGCAGCAGTTAGTTACGCCGTTTCATCGATTACCGTACTCCACACCAAAGCTTCCGGTGAAGAGGTTTCAAGCGCTAAACGAGTCTCTTAGCCCTAGATCACAGTCTCAAAATAAAGCAGGGTTAAAGGACAACACTATAAAGAAGCAAAAACGATGTAACTGCAAAAATTCCAAATGCCTTAAATTGTACTGCGAGTGCTATGCGGCTGGGATCTATTGTGATGGTTGCAACTGTCAAAATTGTCATAATAATCTGAACAATGAGGCTGCCCGAAAGGAGGCAATTAGAATGACACTGGAAAAAAATCCAAATGCTTTCAGACCAAAAATTGCAAGCAGTCCGCAAAAACCAGAAGTTTCTATGGAGGAAGTGTCTGAAATTCAATTGATAGGAAGGCACAATAAAGGATGTCACTGCAAGAAAGGTTGCCTTAAGAAGTATTGTGAGTGTTTCCATGCCAACGTCCTCTGCTCTGAAAATTGTAAATGCATTGACTGCAAGAATTTTGAAGGAAGTGACGAATGGAGAATGGTTTTACAAGAAGAGTGTAGTATAGTTCAAATCAGACAGGCAACTAATGCTGCCATTAATGGAGCAGTTGGACTTGGACCCTCCATCTCTGGGACCCATATAACACCCAAGAAGAGAAAAATCCAGGAAAGTTTTTCTGGCAAATCACTCACAGATCAAACTGTTAGCATGACTGCTCAACACCAACAGGAACTTGATCCTATAGCTTCATCTCCCTTATCCCTGTCAGCTTCCTTTGTTTCCGACACTGCCTATAAAAGAATTTCAAGACCTAAACTCAGGTCTGTGTTGGCTGATATCCTCCAGACACAGAATGTGAAAAATCTTTGCTCACTTTTAGTTGTTCTCTCCAAAGAAGCTGCAAAGACAAATGCAGAAATGAGAGGGAAAGCTGCTAGGAAAATAGAGACCGAGAAATATGAAGCTTCTATTGCTTCATCATCTCAATTGCTGCAAGACAGTAGAGATGTTGTCAAGCCTGTTTCGGAGAATCATGCAAATAAAGATGTAGCAGAGGCAGTTGATATTGACATTCATAATAGGCCACTGTCACCAGAAACACTTAAATTGATGTGTGATGAACAGGATGGGATGTTTTTCGGTAATGGTTCTGCAAATGGAGTTGCAATTGACAATACTTATCAGAACATGATTCAAAAGTCTTCCAACTCTGATGGATACACTGCTGTTTATGCAGAGCAGGAAAGGCTTATCCTGACCAAGTTCAGGGATGTTCTTGGTGAACTGATTATTCTTGGTAGCATTAAAGAAACAATGCACTCTTCATCAGTGAAGAAAGATGTGAGTATCGAGAAAACACCTAAAAACAATGGTGATAGGGTTGCTGAAACTAAGGGGATTCTTCTCAACAACTGCACTGCCAATTGCTCCATCCCAGTGGCTACCTATGCAAGAACTAATGGACATGATACTACTGATCTTTCATTGAGGTTGCCTGCGGATTGA 1794 0.4348 MEKSETTLDLANRKFARQLDFAAACGAPSYLTLSPPTPQSLSQTIPRPPAPSHLPPPVQMHLDFQSPVRRPWKQSPPQWQQQRTSQSPPVMPHFQSPRPQQLVTPFHRLPYSTPKLPVKRFQALNESLSPRSQSQNKAGLKDNTIKKQKRCNCKNSKCLKLYCECYAAGIYCDGCNCQNCHNNLNNEAARKEAIRMTLEKNPNAFRPKIASSPQKPEVSMEEVSEIQLIGRHNKGCHCKKGCLKKYCECFHANVLCSENCKCIDCKNFEGSDEWRMVLQEECSIVQIRQATNAAINGAVGLGPSISGTHITPKKRKIQESFSGKSLTDQTVSMTAQHQQELDPIASSPLSLSASFVSDTAYKRISRPKLRSVLADILQTQNVKNLCSLLVVLSKEAAKTNAEMRGKAARKIETEKYEASIASSSQLLQDSRDVVKPVSENHANKDVAEAVDIDIHNRPLSPETLKLMCDEQDGMFFGNGSANGVAIDNTYQNMIQKSSNSDGYTAVYAEQERLILTKFRDVLGELIILGSIKETMHSSSVKKDVSIEKTPKNNGDRVAETKGILLNNCTANCSIPVATYARTNGHDTTDLSLRLPAD 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07600 597 MobiDBLite consensus disorder prediction 68 97 - -
Mepo3g07600 597 SMART CXC_2 231 271 IPR033467 -
Mepo3g07600 597 SMART CXC_2 146 186 IPR033467 -
Mepo3g07600 597 ProSiteProfiles CRC domain profile. 147 270 IPR005172 -
Mepo3g07600 597 MobiDBLite consensus disorder prediction 71 97 - -
Mepo3g07600 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 148 183 IPR005172 -
Mepo3g07600 597 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 234 267 IPR005172 -
Mepo3g07600 597 PANTHER TESMIN/TSO1-RELATED 38 528 IPR028307 -
Mepo3g07600 597 Coils Coil 181 201 - -
Mepo3g07600 597 MobiDBLite consensus disorder prediction 34 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07600 Mepo-Chr3 89276749 89282544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07600 13 534 CPP Transcription Factor Family AT4G29000 41.575 1.46e-108 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Mepo3g07600 TCR 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07600 - K21776 gmx:100811459 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07600 3 89276749 89282544 Mepo3g07600 3 89276749 89282544 ECH