Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07585 ATGGGAAGTGAGACGACAATTCCTGCTCTATTAGATGGTGTACAGAAAATTAGAGCATTACATGGGAGGACTACTGGCCCTACAAGGCGCTCCACTAAAGGACAATGGACACCTGAGGAGGATGATATATTGAGGAAGGCTGTTGAGCGTTTTCAAGGAAAAAATTGGAAAAAAATAGCGGAGTGTTTCAAGGATAGAACTGATGTACAGTGCCTGCATAGGTGGCAAAAAGTCTTAAATCCAGAACTTATCAAAGGTCCTTGGTCTAAAGAGGAAGATGAAACAATTGTTGATTTGGTAAACAAATATGGGCCTAAAAAGTGGTCTACTATCGCACAACATTTACCTGGACGTATCGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTTCTATAAACAAAGAAGCATGGACGCAGGAAGAAGAGTTGGCTCTAATACATGCTCATCAGATATATGGGAATAGATGGGCAGAATTATCAAAGTTTTTGCCTGGAAGGACAGACAATGCTATAAAGAACCACTGGAATAGTTCTGTTAAGAAAAAATTGGATTCCTACTTGGCGTCAGGCTTGCTTGCTCAGTTTCAAAATGTCCCACTTGTTGGAAACCCGAACCAACCTATTGCTTCATCCTCTGCAAGGTTGCAATTTAGTGTAGATGATAATGGTCCTAGGAGCACGGAAGGTGAGGAAGTTTCACAGTGTAGCCAGGAGTCAGTTAACGCTAGTCATTTTCCGTCTGGCAGAGAGTTGAGCATTGCCGTTATACAAAATGTGGAGGAGTACAGGCAAAATGAAGAATCTAATCAATCATCATGTTCAGAGCCATATTACATGTCTCTGGATGGTGTTACTCGCCAAGAGGTTTGCTCCTCTCAATTTCTTGAGCAAAAATATTCAAACGAACCTGGGAGTTCCTCCGCAAACTTGGACTGCCAATTTAATTTACATGCTTTGCCCACCTCACTGGACTTTGGGCAGGAATCGACGCAGTTGCAAAATGATTCTTTAGCTTCTAGTGAAAGTCATGACATGATTATTGTTCCATATGAATATCGGCCTTCATCTATGGGCAATGCTAAAGGAGAACAAAACATGTTGATAACTGATGATGAATGTTGCAGATTCCTATTTTCAGAGGCAATGAGCGATGAATGTTTTTCCTCTGGAGGAGTAAATAATGTTGACTTGTCTGGATACACTTCATCTCTTTGTCATTCGTCTTTACCATCTGATAGTAGGATGATAATGTATACTGCCGAAGAAAATCAGTTGGTCGGCTCTGAGGATCAGCAGTTTGTCTCGAGGGAAGATGTTGTGAAAGATGATAGTTTAAAATTGGAGCCTGTAAGTAGTTCTGGATGTGGATCAGATACGATGCAAACTTGCTATCCAATTGATGAAAAGCCAAATGTGCATACACAACAGGAGGAAACAGGAGGAACTCTATGTTATGAACCACCTCGTTTTCCAAGCTTGGATATACCTTTCTTGAGCTGTGATCTTATACAATCTGGAGATATGCAGCAAGAATTTAGTCCCTTAGGTATCCGCCAGTTTATGATGTCTTCCATGAACTGTCTGACTCCTTTCAGATTGTGGGACTCGCCTTCTCACATTGATAGTCCGGACGCTTTGTTAAAAAGTGCTGCTAAAACTTTCACAAGTACACCGTCCATAATGAAGAAGAAGAAACGAAACCGAGACAGAGACCTTTTATCTCCACTATCAGATAGAAGAATGGAGAAGAAACATGAGATTGACATGACGTCAACTTTGATTAGAAACTTTTCCCGTTTGGATGTCATGTTTGATGACAATGAGACTCAAGGTATTGAAGATGATAAAGAAAATCGTGGACCAGCTTTTAAGGTGGAGGATAAAAGTAACTCTAAAGAGAAGATTGAGCAGCCTCCACTTGATGCCAATTCTAAGATGAAGAATGATATTGATACTACTGCTGAAATTGTGCAACAGCCTTCTCGAGTTTTGATTGAACATGATATGAATGATCCATCGCTGTATTCTCCTAATCAAGTTGGTTTGAAATCAGACATAGTTCTAAGTTTAAGTGCTCGAAGTCATAAAAAATCAGTCTCAAGATTTAGCTCTCCTTGTGTTCGTTTAAAGGAGCACGAAAGACTCTCAGTTTCTGTTACTTGTGTACAATCCGTCTGTTCATCATCAATCCCAGGAGAGAATATGGGTGATCAAACCGGAAACGATGGTGGTTTTGAAACAAATAACATTTTTGGAGGAACACCTTTTAGGAAAAGCTTTGAATCACCTTCAGCATGGAAATCCCCTTTGTTCATAAACACCTTTTTATCTAGTCCTAGGATTGATGCTGAAATTACTATCGAGGACTACGGATGTTTCTTTAGCCCGGGTGATAAAAGCGGCTATGATGCACTTGGATGGATTAAGCAGATTGGTGAACACACTGCTGCTCAATATGCCAATGCTTTAGAGGCTTTAGAAAATGAAACTCCTAAGGCACTACCAAACGATGCCTCTGGAGACGACCAGGAAAACAACGATCCTCATAATCAGCCTGGGAACCATTCTAAGTCGCCTTCAAATGCTTCGGTGGAGCGGCGCATGCTTGACTTCAGCGAATGTGGAACTCCAAACAAAGGTGATAAGGGCAAATCCTCAGCTATGAGTGTTTCAAGTCCTTCTTCATATTTGCTGAAGGGCTGTAGATAG 2718 0.4091 MGSETTIPALLDGVQKIRALHGRTTGPTRRSTKGQWTPEEDDILRKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELIKGPWSKEEDETIVDLVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPSINKEAWTQEEELALIHAHQIYGNRWAELSKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLAQFQNVPLVGNPNQPIASSSARLQFSVDDNGPRSTEGEEVSQCSQESVNASHFPSGRELSIAVIQNVEEYRQNEESNQSSCSEPYYMSLDGVTRQEVCSSQFLEQKYSNEPGSSSANLDCQFNLHALPTSLDFGQESTQLQNDSLASSESHDMIIVPYEYRPSSMGNAKGEQNMLITDDECCRFLFSEAMSDECFSSGGVNNVDLSGYTSSLCHSSLPSDSRMIMYTAEENQLVGSEDQQFVSREDVVKDDSLKLEPVSSSGCGSDTMQTCYPIDEKPNVHTQQEETGGTLCYEPPRFPSLDIPFLSCDLIQSGDMQQEFSPLGIRQFMMSSMNCLTPFRLWDSPSHIDSPDALLKSAAKTFTSTPSIMKKKKRNRDRDLLSPLSDRRMEKKHEIDMTSTLIRNFSRLDVMFDDNETQGIEDDKENRGPAFKVEDKSNSKEKIEQPPLDANSKMKNDIDTTAEIVQQPSRVLIEHDMNDPSLYSPNQVGLKSDIVLSLSARSHKKSVSRFSSPCVRLKEHERLSVSVTCVQSVCSSSIPGENMGDQTGNDGGFETNNIFGGTPFRKSFESPSAWKSPLFINTFLSSPRIDAEITIEDYGCFFSPGDKSGYDALGWIKQIGEHTAAQYANALEALENETPKALPNDASGDDQENNDPHNQPGNHSKSPSNASVERRMLDFSECGTPNKGDKGKSSAMSVSSPSSYLLKGCR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07585 905 PANTHER MYB PROTEIN-RELATED 33 106 - -
Mepo3g07585 905 ProSiteProfiles Myb-like domain profile. 80 131 IPR001005 -
Mepo3g07585 905 FunFam Transcription factor MYB3R-2 138 200 - -
Mepo3g07585 905 SUPERFAMILY Homeodomain-like 34 89 IPR009057 -
Mepo3g07585 905 Coils Coil 812 832 - -
Mepo3g07585 905 MobiDBLite consensus disorder prediction 885 899 - -
Mepo3g07585 905 CDD SANT 36 79 IPR001005 -
Mepo3g07585 905 ProSiteProfiles Myb-like domain profile. 28 79 IPR001005 -
Mepo3g07585 905 Gene3D - 85 136 - -
Mepo3g07585 905 SUPERFAMILY Homeodomain-like 82 178 IPR009057 -
Mepo3g07585 905 CDD SANT 139 179 IPR001005 -
Mepo3g07585 905 Gene3D - 32 84 - -
Mepo3g07585 905 ProSiteProfiles Myb-like domain profile. 132 182 IPR001005 -
Mepo3g07585 905 FunFam Transcriptional activator Myb isoform A 85 137 - -
Mepo3g07585 905 CDD SANT 87 131 IPR001005 -
Mepo3g07585 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 136 186 IPR017930 -
Mepo3g07585 905 Pfam Myb-like DNA-binding domain 33 79 IPR001005 -
Mepo3g07585 905 Pfam Myb-like DNA-binding domain 85 131 IPR001005 -
Mepo3g07585 905 Pfam Myb-like DNA-binding domain 137 179 IPR001005 -
Mepo3g07585 905 SMART sant 32 81 IPR001005 -
Mepo3g07585 905 SMART sant 84 133 IPR001005 -
Mepo3g07585 905 SMART sant 136 184 IPR001005 -
Mepo3g07585 905 MobiDBLite consensus disorder prediction 834 905 - -
Mepo3g07585 905 MobiDBLite consensus disorder prediction 614 649 - -
Mepo3g07585 905 FunFam Transcriptional activator Myb isoform A 32 84 - -
Mepo3g07585 905 MobiDBLite consensus disorder prediction 615 643 - -
Mepo3g07585 905 MobiDBLite consensus disorder prediction 842 868 - -
Mepo3g07585 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 80 135 IPR017930 -
Mepo3g07585 905 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 79 IPR017930 -
Mepo3g07585 905 Gene3D - 138 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07585 Mepo-Chr3 89169146 89174854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07585 430 905 MYB Transcription Factor Family AT4G32730 40.900 4.04e-91 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g07585 Myb_DNA-binding 2.6e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07585 - K09420 psat:127084879 1499.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07585 3 89169146 89174854 Mepo3g07585 3 89169146 89174854 ECH