Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07582 ATGGAAGCTGCCAGGAGACAAGAAACAATTGATTCCGGAGCTGAAGTAGAATACAAACCTCTTCCAACTGGACTAAATGGTGCCACTGAAAAAGACGCCAAGGTACATAAAGTCACTATAATTGAAAATGTGTACTGGAAGGAGTTTGGACTTCTAACATTTGTTTGGGTTTCATTCATTGCAGTACAGATTGCCAAGCAAAACTACACATCTACATGTTCAACAGCGTATTGGGTATTGAACTTCTTACAGATTCCAATCTCATTTGGGGTAACTGTATATGAGGCAACTGCATTATTCACAGGGAAAAAAGTATTAGCTTCCATAGGTGTCAAGTGCCACAACAACGTTCATCATGACCTTCTCCGCATCTATGTGTGTTGTGGAATACTACATGCTGAAACGATTTCCGGTTCCTTATGGTTATTGTCCAAAATTGGAGTTAAACCTAATTCAATAGTGGCTACTACTACTATCACTGATGCCATTAACTCGTACTCGTCGAAAAAAACTCGAGATAGATTCATCGTCTATGTCAAGGCTGGTATCTACAACGAGTACATTACAATTGGTAAGGACAAGGCTAACATTCTCTTGTATGGCGATGGCCCAACGAAGACAATTATCACTGAAAACAGGAGTGTGAACGAAGGAGTGAATAAAACAATGAACGCATCCATTCTTGCCAATGATTTCATTGCAAAGTCAATTACATTTGAAAACACTGCCGGTCATGAAGCTGGCCCGTCTGTGGCAGTTCAAGTAGAAGGTGATTGTTCAGCATTCTTTGATTGTGGAATACATGGTTATCAAGGCACATTGTATGTGCACAAACACCGCCAGTTCTACCGCAATTGCGAGATCTCTGGAACCATCGATTTCATCTTTGGGCATTCAACCACCTTAATCCAAAACTCCAAAATAATTGTGAGGAAGCCGAGTCCAGGCCATAGCAACGTTGTGGTGGCAGACGAAACAAAACAAAAGAATGCACAAACTGGAATAGTCCTTCAAAATTGCTCGATCATGGCAGATGTTGAGCTTTTACATGATAGGTTGACAGTGAAGAGTTATTTGGCAAGACCATGGAAGCCATTTTCAAGGGCAATATTTATTAATAATGTTATAGGTGATTTTATTCAACCAGATGGGTATTCTGTTTGGGCTCCTAATGAAACAAACACTGCAAACTGTTACTTTGCTGAGTTTGGTAACACTGGACCTGGTGCTAATGCTCAAGCAAGGGCTAAATGA 1254 0.4051 MEAARRQETIDSGAEVEYKPLPTGLNGATEKDAKVHKVTIIENVYWKEFGLLTFVWVSFIAVQIAKQNYTSTCSTAYWVLNFLQIPISFGVTVYEATALFTGKKVLASIGVKCHNNVHHDLLRIYVCCGILHAETISGSLWLLSKIGVKPNSIVATTTITDAINSYSSKKTRDRFIVYVKAGIYNEYITIGKDKANILLYGDGPTKTIITENRSVNEGVNKTMNASILANDFIAKSITFENTAGHEAGPSVAVQVEGDCSAFFDCGIHGYQGTLYVHKHRQFYRNCEISGTIDFIFGHSTTLIQNSKIIVRKPSPGHSNVVVADETKQKNAQTGIVLQNCSIMADVELLHDRLTVKSYLARPWKPFSRAIFINNVIGDFIQPDGYSVWAPNETNTANCYFAEFGNTGPGANAQARAK 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07582 417 PANTHER PECTINESTERASE 122 416 - -
Mepo3g07582 417 Pfam Pectinesterase 155 416 IPR000070 GO:0030599|GO:0042545
Mepo3g07582 417 ProSitePatterns Pectinesterase signature 1. 171 190 IPR018040 -
Mepo3g07582 417 FunFam Pectinesterase 4 145 417 - -
Mepo3g07582 417 SUPERFAMILY Pectin lyase-like 148 415 IPR011050 -
Mepo3g07582 417 Gene3D - 144 417 IPR012334 -
Mepo3g07582 417 ProSitePatterns Pectinesterase signature 2. 288 297 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07582 Mepo-Chr3 89147429 89156391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07582 158 415 Carbohydrate Esterase AT3G62170 48.289 2.44e-72 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07582 K01051 - gmx:100808559 356.681