Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07562 ATGCAGCAGCAGCTCCACCTCCTTCAATTCCAAAGGTACCGAGAAATTTGGCAGTGGTTGGTGACGATGGAATCGAAAGAAAGTATGCTTCGCCTCCGAGAAGAGACGACGATCGTGATGGCCATTATGTCTTTAATCTCGGCGAAAATCTCACTCCTAGATATAAAATTCTCAGCAAAATGGGTGAAGGTTAGCGGTCAAGTGCTCTCTGAATACAAGTTTAAATTTTTATTTGACTCTGCTTGTGTCATTCAGCATGTTGCTAGTGCTGTAGGCACCTTCGGTCGAGTTTTGGAATGTTGGGATCGTCAAACCAGAGATTATGTAGCTATCAAGGTAATCAGAAGCATCAAGAAGTATCGTGATGCAGCAATGATCGAGGTTGATGTGCTTGAACGTCTTGTGAAGAGTGATGTGGGATGCTCACGCTGTGTACAGATCCTGAATTGGTTCGACTACCGGAATCACATATGCATTGTCTTTGAGAAGCTTGGACCAAGCTTATTTGATTTTCTAAAGAGAAATAAATACTGCCCATTCCCTGTGGATCTTGTTCGTGAATTTGGACGACAGCTTTTGGAATCTGTAGCATATATGCATGAACTACGCCTAATCCACACCGACCTGAAGCCAGAAAATATACTTCTTGTTTCTTCTGACTATGTAAAGCTTCCTAGTTGTAAGAGGGTTATGTCAGATGAAACACAATTTAGGTGCTTGCCTAAGTCTAGTGCGATTAAGCTGATTGATTTTGGTAGTACTGCATTTGCAAATCAGAGCCATAGCTCCATTGTTTCTACAAGGCATTATAGAGCCCCAGAGGTTATCTTAGGTCTAGGGTGGTCATCTCCGTGTGATTTGTGGAGTGTTGGATGCATTCTCATTGAGTTATGCACGGGAGGAGCGTTGTTTCAGACTCACGAAAATTTGGAGCACCTGGCAATGATGGAGAGAGTTTTGGGACCTCTACCAGAGCATATGGTTCAAAGGTCTAAGGGTACGGAAAAATATTTTAAGCGTGGATCACGACTAAGATGGCCCGAAGGAGCTGTTTCAAGGGAGAGCATAAATGCAGTGAAGAAGCTTGGTGATCTTAAGGATATTATATCACGTCATGTTGAGTCGTCAAGGTCCTCATTAACTGATTTGTTGTATGGCTTATTAACATATGATCCATCCAAACGCATTACTGCTCGCCAAGCTCTTGATCATCCCTTCTTTAGGATTCCAACTTAA 1236 0.4264 MQQQLHLLQFQRYREIWQWLVTMESKESMLRLREETTIVMAIMSLISAKISLLDIKFSAKWVKVSGQVLSEYKFKFLFDSACVIQHVASAVGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDVLERLVKSDVGCSRCVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLIDFGSTAFANQSHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHENLEHLAMMERVLGPLPEHMVQRSKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDIISRHVESSRSSLTDLLYGLLTYDPSKRITARQALDHPFFRIPT 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07562 411 FunFam Serine/threonine-protein kinase AFC2 159 407 - -
Mepo3g07562 411 Gene3D Phosphorylase Kinase; domain 1 92 163 - -
Mepo3g07562 411 Gene3D Transferase(Phosphotransferase) domain 1 137 407 - -
Mepo3g07562 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mepo3g07562 411 SMART serkin_6 83 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07562 411 Pfam Protein kinase domain 92 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07562 411 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 92 408 - -
Mepo3g07562 411 SUPERFAMILY Protein kinase-like (PK-like) 92 408 IPR011009 -
Mepo3g07562 411 CDD PKc_CLK 92 407 - -
Mepo3g07562 411 ProSiteProfiles Protein kinase domain profile. 83 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07562 Mepo-Chr3 88936968 88941390 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07562 92 408 Core Cell Cycle Gene Families AT3G48750 27.778 7.44e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mepo3g07562 Pkinase 2.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07562 K08287 - gmx:100782453 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07562 3 88936968 88941390 Mepo3g07562 3 88936968 88941390 ECH