Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07558 ATGGAGAAGGAGAGGACCAGGGATATAGAATTAATGGAAGAAAGTGGTGGAAAAGAGGAAACCCTACCACCGGGATTTCGATTTCATCCAACAGATGAAGAACTCATCACTTGCTATCTCATAAACAAGATATCAGATTCTAGTTTTACAGGCAAAGCAATAACTGATATAGATCTCAATAAATCTGAACCATGGGAGCTACCTGGGAAGGCAAAGATGGGAGAAAAGGAATGGTACTTTTTCAATATGAGAGATCGTAAATATCCAACGGGTGTGAGAACCAATCGAGCAACAAACACCGGATACTGGAAGACCACAGGAAAAGATCGAGAAATCTTTGACAGTGTTACATCGGAGTTGGTTGGAATGAAGAAGACTTTGGTCTTTTACAAAGGCAGAGCTCCTAGAGGAGAGAAAAGTAATTGGGTCATGCATGAATACCGCATTCACTCTAAATCCACCTTTAGAACAAACAAGGATGAATGGGTGATTTGTCGGATTTTCAAGAAGAGTGGCAGTGGAAAAAAGTACCCTTGTAATTCCAGTTCCAACAATACAAGAGCAGGATTGAATCCTTATAGCATGCAGGAAATAGGTCCTAATAACATAAATCTGATATCGATGCCACCACCAATGATTCAACATCTGCATGAAGATTTTCCTTCTGCTCCTCGTAATTTCCTTTACGGACGGAATCAGCATAATAATAATTACATCAACTGTAATTCTACTGCACCAATGATGCAATATTCCCAGTTGAACTACCCTGCATTTTCAGCAACAGGAGGAGAAGGATTCAGCATTTCAGGGCTTAATTTGAACCTTGGATCGCGCGGAGGAGGAGGAGGAGCTACCACAACAACACAAACCACTTTGCGGCCAATGCAACATTCCCCACATTTTGCTCATGCAACAATGAATATGAGTGCAGACAATAATTATGTTGATGCAGATCAGAATATTATTAATAATATTGGAGTACTAGAAACCATGAGCAACAGCAATAGGTATATGGGAATGGAGAATTGCATGGGTCTAGATACTTACTGGCCTAATTCCTACTAA 1065 0.4028 MEKERTRDIELMEESGGKEETLPPGFRFHPTDEELITCYLINKISDSSFTGKAITDIDLNKSEPWELPGKAKMGEKEWYFFNMRDRKYPTGVRTNRATNTGYWKTTGKDREIFDSVTSELVGMKKTLVFYKGRAPRGEKSNWVMHEYRIHSKSTFRTNKDEWVICRIFKKSGSGKKYPCNSSSNNTRAGLNPYSMQEIGPNNINLISMPPPMIQHLHEDFPSAPRNFLYGRNQHNNNYINCNSTAPMMQYSQLNYPAFSATGGEGFSISGLNLNLGSRGGGGGATTTTQTTLRPMQHSPHFAHATMNMSADNNYVDADQNIINNIGVLETMSNSNRYMGMENCMGLDTYWPNSY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07558 354 MobiDBLite consensus disorder prediction 1 17 - -
Mepo3g07558 354 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 251 - -
Mepo3g07558 354 Gene3D NAC domain 31 174 IPR036093 GO:0003677|GO:0006355
Mepo3g07558 354 ProSiteProfiles NAC domain profile. 22 170 IPR003441 GO:0003677|GO:0006355
Mepo3g07558 354 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
Mepo3g07558 354 SUPERFAMILY NAC domain 19 170 IPR036093 GO:0003677|GO:0006355
Mepo3g07558 354 FunFam NAC domain-containing protein 100-like 31 174 - -
Mepo3g07558 354 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07558 Mepo-Chr3 88918269 88922265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07558 13 352 NAC Transcription Factor Family AT2G24430 50.000 2.37e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo3g07558 NAM 9.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07558 - - gmx:100804931 390.963