Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07555 ATGGCAACAACGGAATCAGATCTTGATGAGTTTTTGAATCTCGATTACGAGTTTCGGTATCCAAGTCTTGCCGATACGGAGGCATTCATGACCGGAGTTTGCTCCGCCGCTTTCCAAACTCTACTACCGGATGTTGTGAGTTCATTTTCAACTTGTGGTGGACTAACAGACTCCCAAAACATTACTCCCAAACATTCCACCATCACTGCTACTATTGATTCTCAGTCATCTATTTATAGCACTGTTGGAAGCCCAGTTTCAGCTAATAAACCAAACGGCAGAGAGAATAACATCAAAGGGACATCAAGTGGTTCATCTGATCCATCCGATGAGGATAATGAATCAGGTCCTTGTGAACAAATTACAAATCCACTTGATATGAAACGCCTTAGAAGGAAGGTTTCTAATTGTGAGTCAGCCAGGAGGTCAAGGTGGAGAAAACAAGCGCATTTGTCTGAACTTGAGTCTCAGGTTGAAAAACTGAAACTGGAAAATGCGACACTATACAAACAGTTTACGGATACTAGTCAACAATTTCATGAGGCTGATACAAATAACCGAGTGCTAAAATCAGATGTAGAAGCTTTGAGAGCTAAGGTGAAGTTAGCCGAGGATATGGTCACTAGAAGCTCTTTCACCACATCACTAAACAATCAGTTTCTTCATAATCAATGTCAAATGAGCACACCACCACAACTCAACATGACTACTAATATTCGCCGCATGCCACATGTTTCGCCAACCATCAATGTCCAGCAGGGAAATAGTGCCGCATACGGTGGTGTTGCAGTTGGCGTGCACAATTCAAATCTTGATGGGTTTGGAAACTTGGACATGCCTTACAATGATGTCGTCGACAACGGGGTCCTAAGCAATGCTATGAGTTGTGTAACTATTTGGCCTTAA 906 0.4249 MATTESDLDEFLNLDYEFRYPSLADTEAFMTGVCSAAFQTLLPDVVSSFSTCGGLTDSQNITPKHSTITATIDSQSSIYSTVGSPVSANKPNGRENNIKGTSSGSSDPSDEDNESGPCEQITNPLDMKRLRRKVSNCESARRSRWRKQAHLSELESQVEKLKLENATLYKQFTDTSQQFHEADTNNRVLKSDVEALRAKVKLAEDMVTRSSFTTSLNNQFLHNQCQMSTPPQLNMTTNIRRMPHVSPTINVQQGNSAAYGGVAVGVHNSNLDGFGNLDMPYNDVVDNGVLSNAMSCVTIWP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07555 301 MobiDBLite consensus disorder prediction 80 120 - -
Mepo3g07555 301 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 126 189 IPR004827 GO:0003700|GO:0006355
Mepo3g07555 301 Coils Coil 186 206 - -
Mepo3g07555 301 Coils Coil 144 171 - -
Mepo3g07555 301 PANTHER BASIC LEUCINE ZIPPER 63 57 272 - -
Mepo3g07555 301 SMART brlzneu 124 188 IPR004827 GO:0003700|GO:0006355
Mepo3g07555 301 MobiDBLite consensus disorder prediction 80 122 - -
Mepo3g07555 301 Gene3D - 127 184 - -
Mepo3g07555 301 CDD bZIP_plant_GBF1 129 180 IPR045314 GO:0003700|GO:0006355
Mepo3g07555 301 FunFam BZIP transcription factor 126 177 - -
Mepo3g07555 301 Pfam bZIP transcription factor 127 173 IPR004827 GO:0003700|GO:0006355
Mepo3g07555 301 SUPERFAMILY Leucine zipper domain 127 179 IPR046347 GO:0003700|GO:0006355
Mepo3g07555 301 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 131 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07555 Mepo-Chr3 88891830 88896177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07555 73 301 bZIP Transcription Factor Family AT5G24800 46.610 1.78e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo3g07555 bZIP_1 5e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07555 K25784 - gmx:780555 372.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07555 3 88891830 88896177 Mepo3g07555 3 88891830 88896177 ECH
Mepo3g07555 3 88891830 88896177 Mepo4g00776 4 10209399 10214917 PCT