Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07543 ATGGATCCACCAAAGAAACCTAACAAAATCAGAGAAATTGTTAGACTTCAACAGATCCTTAAGAAATGGAGAAGAGTAGCCAATACTTCAAAAACAAACAGCAGCAACAATAACAACAGTACTACTAGTAAAAGCATAAAGTTTCTGAAAAGAACACTTTCAATGTCCGAACGGGAAGGAGGAGGATCAAACAATGCGGTTCCGAAAGGCTACCTAGCCGTTTGTGTTGGTGTAGACCTTAACAGGTTTGTTATACCAACTGAGTATTTGGCTCACCAAGCCTTTCACATATTACTCAGAGAAGCTGAAGAAGAATTTGGGTTTGAACAAACTGGTGTTCTGAGAATTCCTTGTGAAGTTTCAGTGTTTGAGAGTATTTTGAAGATGGTTGAAGGAAAGGATAGATTTTCTACTCAGAAATGTAGATTTGGCATTGAAAAGATGATGGGATACTGTTCCTCAAACCAGCTTGGTTATTATCATCAACCTCATAGTCCAATGTGCAGATAG 510 0.3824 MDPPKKPNKIREIVRLQQILKKWRRVANTSKTNSSNNNNSTTSKSIKFLKRTLSMSEREGGGSNNAVPKGYLAVCVGVDLNRFVIPTEYLAHQAFHILLREAEEEFGFEQTGVLRIPCEVSVFESILKMVEGKDRFSTQKCRFGIEKMMGYCSSNQLGYYHQPHSPMCR 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07543 169 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 126 IPR003676 GO:0009733
Mepo3g07543 169 Pfam Auxin responsive protein 22 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07543 Mepo-Chr3 88803320 88804131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07543 5 169 Calmodulin-binding Proteins AT4G31320 51.042 8.49e-58 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07543 K14488 - pvu:PHAVU_009G103800g 277.33