Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07499 ATGGCAGTGAAACCTACCAAAGCTGAGAAGAAGCAGAACTACGATGCTAAGCTCTGCCAGCTTATCGATGAATACACCCAAATCCTTGTTGTCAACGCCGACAACGTTGGATCTAATCAGCTTCAGAACATTCGTCAGGGTCTACGTGGTGACTCCGTTGTTCTCATGGGAAAGAACACCATGATGAAGCGATCTGTTCGTATGCACGCTGAGAAAACCGGCAACAATGCTTTTCTCAACCTTATCCCTCTTCTTGTTGGAAATGTTGGTTTGATTTTCACAAAAGGTGACTTGAAGGAAGTCAGTGAAGAAGTTGCTAAATACAAGGTTGGAGCTCCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTCGTTGTTCCTCCAGGCAACACAGGGCTTGACCCATCTCAGACCTCTTTCTTCCAGGTGCTCAACATCCCAACCAAGATTAACAAGGGTACTGTGGAAATCATTACCCCTGTGGAACTCATTAAGAAAGGAGACAAGGTTGGATCTTCTGAAGCTGCATTGCTTGCCAAGTTAGGCATTAGGCCCTTTTCATATGGGCTTGTGGTCCTTTCTGTTTATGACAATGGTTCAGTGTTTAGCCCTGAGGTTCTTGACCTAACTGAGGATGACCTTGTTGCGAAGTTTGCTATTGGGGTTTCCATGGTCACTTCACTTTCATTGGCCATCTCTTACCCGACACTTGCAGCTGCTCCTCATATGTTTGTCAATGCCTACAAAAATGTTCTTGCTTTTGCAGTTGCTACTGAATATTCTTTCCCTGAGGCAGACAAGGTTAAGGAGTACCTTAAGGACCCAAGTAAATTTGCTGTAGCTGTTGCTGCCCCAGCTGCTGCTGCATCTGGTGGTGCCCCTGCTGCCGCTGCCAAGGAGGAGGCAAAGAAGGAAGAGCCTGAAGAAGAGTCTGATGAAGACATTGGTTTTGGTCTGTTTGGTGATGATTAG 972 0.4619 MAVKPTKAEKKQNYDAKLCQLIDEYTQILVVNADNVGSNQLQNIRQGLRGDSVVLMGKNTMMKRSVRMHAEKTGNNAFLNLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVAKFAIGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAFAVATEYSFPEADKVKEYLKDPSKFAVAVAAPAAAASGGAPAAAAKEEAKKEEPEEESDEDIGFGLFGDD 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07499 323 CDD Ribosomal_P0_L10e 9 185 - -
Mepo3g07499 323 MobiDBLite consensus disorder prediction 306 323 - -
Mepo3g07499 323 FunFam 60S acidic ribosomal protein P0 113 186 - -
Mepo3g07499 323 Gene3D - 114 185 IPR043164 -
Mepo3g07499 323 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Mepo3g07499 323 Gene3D - 6 209 IPR043141 -
Mepo3g07499 323 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Mepo3g07499 323 Pfam Ribosomal protein L10 7 108 IPR001790 -
Mepo3g07499 323 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 4 302 - -
Mepo3g07499 323 Pfam 60s Acidic ribosomal protein 234 320 - -
Mepo3g07499 323 MobiDBLite consensus disorder prediction 293 323 - -
Mepo3g07499 323 PIRSF L10E 1 321 IPR030670 GO:0042254
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07499 Mepo-Chr3 88326390 88329034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07499 1 321 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 84.112 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07499 K02941 - jre:108991896 517.309