Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07487 ATGGGTGTAGATTACTACAACATTTTGAAGGTGGATAAAAATGCTACAGAAGATGATTTGAAGAAAGCATATAGAAAATTGGCAATGAAATGGCACCCTGACAAGAACCCTAACAATAAAAAAGAAGCTGAAGCCCGTTTCAAACAGATCTCTGAGGCTTATGCGGTATTGAGTGATCCTCAAAGAAGGAATGTTTATGATCAGCTTGGAGAACAAGGGTTAAAAGAAAGGCCATCGCCAGAAACTGAGTCGCCAAGTGGATTTTATCCAAGAAGTGCAGAGGATATCTTTGCAGAATTCTTTGGAAGTAGTCCTTTGAATTTTGGATCATCTGGACCAGGGAGGTCCAAGAGATTTCCATCTGATGGTGGAGGAGGAAATGGTGGATTCAGTGGAGATTTTAATTCTAGAACACATAGCGAAAGAGCCAATACGCCAAAGAAACCTCCGCCTGTTGAGACTAAATTGCCTTGTAGTTTGGAGGAGTTGTATTCTGGTTCTACAAGGAAAATGAAGATCTCAAGGACTGTAGTGGATTCCTACGGAAGGGAAATTAAGGAAACAGAGATATTAAGCATTGAAGTAAAGCCAGGATGGAAGAAAGGAACAAAGATAACATTCCCAGATAAAGGGAATCAACTAATAAACCAACTTCCAGCAGATCTTGTATTTGTGATTGATGAGAAGCCTCATGAATTGTTCAAGAGAGATGGGAATGACCTTATTGTGAATCAAAAGATATCACTAGCAGAAGCTATTGGTGGAACTTCAGTAAATATCAAAACACTTTATAAACGTAGTTTAAGTGTCCCAGTGAAAAACATTGTGAGTCCTGGTTATGAGCTTGTTGTTGCCAATGAAGGAATGCCAATAACAAAGGAACCCGGTCATAGGGGTGATTTGAGGATCATATTTGAGGTCAAGTTCCCAACAAAATTGACACCAGAACAACGTGCTGCACTAAAGCGAGCATTGGGTGGTTAA 984 0.3984 MGVDYYNILKVDKNATEDDLKKAYRKLAMKWHPDKNPNNKKEAEARFKQISEAYAVLSDPQRRNVYDQLGEQGLKERPSPETESPSGFYPRSAEDIFAEFFGSSPLNFGSSGPGRSKRFPSDGGGGNGGFSGDFNSRTHSERANTPKKPPPVETKLPCSLEELYSGSTRKMKISRTVVDSYGREIKETEILSIEVKPGWKKGTKITFPDKGNQLINQLPADLVFVIDEKPHELFKRDGNDLIVNQKISLAEAIGGTSVNIKTLYKRSLSVPVKNIVSPGYELVVANEGMPITKEPGHRGDLRIIFEVKFPTKLTPEQRAALKRALGG 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07487 327 FunFam Dnaj homolog subfamily b member 147 229 - -
Mepo3g07487 327 CDD DnaJ_C 150 313 - -
Mepo3g07487 327 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 325 - -
Mepo3g07487 327 Pfam DnaJ domain 4 67 IPR001623 -
Mepo3g07487 327 CDD DnaJ 4 59 IPR001623 -
Mepo3g07487 327 SMART dnaj_3 3 62 IPR001623 -
Mepo3g07487 327 Gene3D - 151 229 - -
Mepo3g07487 327 FunFam DNAJ heat shock family protein 230 325 - -
Mepo3g07487 327 Gene3D DnaJ domain 3 110 IPR036869 -
Mepo3g07487 327 MobiDBLite consensus disorder prediction 70 89 - -
Mepo3g07487 327 Pfam DnaJ C terminal domain 152 310 IPR002939 -
Mepo3g07487 327 SUPERFAMILY Chaperone J-domain 3 108 IPR036869 -
Mepo3g07487 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 151 232 IPR008971 GO:0006457|GO:0051082
Mepo3g07487 327 SUPERFAMILY HSP40/DnaJ peptide-binding domain 234 320 IPR008971 GO:0006457|GO:0051082
Mepo3g07487 327 Gene3D - 230 326 - -
Mepo3g07487 327 PRINTS DnaJ domain signature 24 39 IPR001623 -
Mepo3g07487 327 PRINTS DnaJ domain signature 62 81 IPR001623 -
Mepo3g07487 327 PRINTS DnaJ domain signature 6 24 IPR001623 -
Mepo3g07487 327 PRINTS DnaJ domain signature 42 62 IPR001623 -
Mepo3g07487 327 MobiDBLite consensus disorder prediction 109 156 - -
Mepo3g07487 327 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Mepo3g07487 327 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07487 Mepo-Chr3 88206578 88208277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07487 5 74 C2H2 Transcription Factor Family AT1G74250 37.838 7.56e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07487 K09510 - tcc:18588934 508.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07487 3 88206578 88208277 Mepo3g07487 3 88206578 88208277 ECH