Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07483 ATGTCTATGAGTAAAGCAAATAGTACATTGTGTGCCAAAGATGAAGAGCGTCCACTCAGAATTACCAGATCAAGGGCAAAAGTTTTGGGAGGACCCTCTTCGGAAAATGAAGGGAAAAGAGCAAGGGTTGTTTCTTCTGAGAATCAAACATGTGTTGTTGTTCCTCACCGTAAAAGAAGGGCAGGGCTTACTGATGTAACTAACATCACTGCAAAACCACATGATAAACGTGTTAAACAATCCAATTTTCAGGCCAAAGGAGTTTATCAGAAGAAAAGTACAAAGCTAACTTCAGATGTCTCCATTGAAGTTTCATCAGCACAAGAGGATGTTAAAGAGAAGGTAACTGAAGAATTGTCTACCATAAAGATGGTAGAGTCAAATGACACCATTGCTGCAGTAATTGATGAACCAACTGAACATTGTATGTCCAACAACATAAGTGAACATGTTATGACAGACACCGCGCTTTCAATGCAAGAATGTGTGAACTCTGGTGAACTCGCTACCTCTCCAAGTCCAAACAAAGACATAAATATGATTTGTGAGATGGTAGGAGCCTCAGATTGCCTGACCTTCGTGGACATCGATAAAAAGTTAAAGGATTCTCAAATTTGGAGTGTTTATGCACCTGATATATACACCAAAGTTCGAGTCACCGAGCTTGAAAAAAGACCATCAACCAATTACATGGAGAAGTTGCAGCAAGATATTTCTCCAAGCATGCGTGGAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTGGTTCCAGACACTCTTTACCTTACTGTGAACCTCATTGATCGGTTTCTCTCAACAAGTTTGATTCAGAAACATAGGCTCCAGTTGCTTGGTATTACTTGCATGTTCATTGCATCAAAATATGAAGAGATGTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACCTACACAAAAGAAGAGGTAGTAAAAATGGAGAAGGAAGTTTTAAACCTTCTGCGTTTTCAGTTATCTGTTCCCACAACCAAAACATTTCTCAGGAGATTCATACAGGCAGCACAATCTTCTTACAAGGTTCCTCTTGCTGAACTGGAATTCCTGGCAAATTATTTAGCAGAGCTCACTCTTGTTGAATACAGCTTCTTACAGTTTCTACCTTCTCGTGTGGCTGCTTCTGCTGTATTCCTTGCCAGATGGACCCTCAACCACTCAGAACATCCATGGACTACAACTCTGGAGCATTTTACAAACTACAAAGCTTCAGAGCTAAAACCAGTTGTTCTTGCACTGGAAGATCTGCAACTTAATACCAAAGTTTGCACCCTCCATGCTATACGTGAGAAATATAAACAAGAGAAGTTCAATGGTGTGGCAAAACTGTCTCCAAAACCGGTGCAGTCACTGTTCCAGGCTCAAGTGTAA 1425 0.4056 MSMSKANSTLCAKDEERPLRITRSRAKVLGGPSSENEGKRARVVSSENQTCVVVPHRKRRAGLTDVTNITAKPHDKRVKQSNFQAKGVYQKKSTKLTSDVSIEVSSAQEDVKEKVTEELSTIKMVESNDTIAAVIDEPTEHCMSNNISEHVMTDTALSMQECVNSGELATSPSPNKDINMICEMVGASDCLTFVDIDKKLKDSQIWSVYAPDIYTKVRVTELEKRPSTNYMEKLQQDISPSMRGILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSTSLIQKHRLQLLGITCMFIASKYEEMCAPRVEEFCFITDNTYTKEEVVKMEKEVLNLLRFQLSVPTTKTFLRRFIQAAQSSYKVPLAELEFLANYLAELTLVEYSFLQFLPSRVAASAVFLARWTLNHSEHPWTTTLEHFTNYKASELKPVVLALEDLQLNTKVCTLHAIREKYKQEKFNGVAKLSPKPVQSLFQAQV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07483 474 PANTHER CYCLINS 166 452 IPR039361 -
Mepo3g07483 474 Gene3D - 212 460 - -
Mepo3g07483 474 MobiDBLite consensus disorder prediction 23 43 - -
Mepo3g07483 474 CDD CYCLIN_AtCycA-like_rpt2 341 455 - -
Mepo3g07483 474 Gene3D - 226 339 - -
Mepo3g07483 474 FunFam Cyclin A1 328 460 - -
Mepo3g07483 474 SUPERFAMILY Cyclin-like 340 463 IPR036915 -
Mepo3g07483 474 SMART cyclin_7 248 332 IPR013763 -
Mepo3g07483 474 SMART cyclin_7 345 433 IPR013763 -
Mepo3g07483 474 FunFam Mitotic cyclin 6 226 326 - -
Mepo3g07483 474 SUPERFAMILY Cyclin-like 202 338 IPR036915 -
Mepo3g07483 474 Pfam Cyclin, N-terminal domain 212 339 IPR006671 -
Mepo3g07483 474 ProSitePatterns Cyclins signature. 243 274 IPR006671 -
Mepo3g07483 474 PIRSF Cyclin_A_B_D_E 20 473 IPR046965 GO:0016538|GO:0044772
Mepo3g07483 474 SMART Cyclin_C_2 341 464 IPR004367 -
Mepo3g07483 474 Pfam Cyclin, C-terminal domain 341 463 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07483 Mepo-Chr3 88168296 88173411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07483 12 470 Core Cell Cycle Gene Families AT5G25380 51.168 1.41e-148 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07483 K06627 - gmx:547780 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07483 3 88168296 88173411 Mepo3g07483 3 88168296 88173411 ECH
Mepo4g00675 4 9071169 9076236 Mepo3g07483 3 88168296 88173411 PCT