Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07481 ATGGCGGTACTGAGAATGGTTCACTCACACTCACAGTCTCAACACAACAACAACAACAACAACATCAGTGGGACCCAACACTTCCTCCATGATTTTCTAGGCATGAAGCCCACTGATACTTCCACCGACGTTAGGTTACCGGATGCATCAGCATCAGCCTCCTCCGCCGGTGCTCGTGGCCCTTTCTCCTCCACCTCCGAAACCGCTTCTGAAAAGCAGGTATCAAATCATCTCGAGGGAGTTCCATTCTATGGCCCAAGAAGTGATTTTTCAGGCACTGAGATAAGTAACAGACTAGTGGGGAATAAGAGAAGTAATTCTGATTCCTCATTTATGGGTTCCTCCAGAGATGCCTTTCAAATGGTCCCTGATTCCTTTCAAAACTCACATTTGATGAAGGTCCTCCGAAATGCATCTGGAGGAGAGAGATCCAGAAGGCCTAATGATGACGAAGTGTTACTTGGTATGCAGTCAATGAAGCCATCTTCTAGTTCTCAGATATTTCATCCTCCCGCCAACACTAAGATTGATGCGAATAAATGGGAACGGTCTATTCTCATGAATGCTGGCCCTTCCATGCAGCATCCTCCACGTGGAGGACAGTTGACTCCTTTTGCACACCAACTAGCTTCAAACAAGCTTCGGGATACCATTGCTGGTCCTTCATTTATCTCTCAGCCTGCCGCTGATGAAGGATCTAGAACTGGAATCAAAGGCCCCGGAATTTTAAGTTCCATAAACACAGCTGCTACTGCTAATGATAAAATTTCATCTGCAGTGCTGCTCAGTGGAAGCAGACCAAAACCTCTAACTAATATAATAGAATCATCCACGCCCCCAAGCAGTCAACATGGGATAACACCTGCCAGCCGCCAGATGACTATCTTTTATGGAGGTCAAGCTCATGTTTTTGATGATGTCCACCAACATAAGGCAGATGTTATAATGGCTTTGGCTGGATCAAATGGTGGATCTTGGTCGACAGCATTCTCACCGAAATCTACTGCAAAGCTAGTCAATGATAGTACCTTGCATAGTGGAGAAAATGAAACAGGGTTAGTGAGTAATGTGGCATTCCCACAAGAGCTTCATGGGAAGTTGTCTGCTACTGGCAGTTCTAGCCGTGCCGTTGGACCTGTTGATCGTGTATCTACTCCAGCCGGGGTACTTCAAGGAAGCATTTTTGCTAAAGATACCAGAAATCCGGCGGTTCAAGCAGCTGATCCCAGTTCCGAAGACAAAAGAGCGCAGTGA 1254 0.4633 MAVLRMVHSHSQSQHNNNNNNISGTQHFLHDFLGMKPTDTSTDVRLPDASASASSAGARGPFSSTSETASEKQVSNHLEGVPFYGPRSDFSGTEISNRLVGNKRSNSDSSFMGSSRDAFQMVPDSFQNSHLMKVLRNASGGERSRRPNDDEVLLGMQSMKPSSSSQIFHPPANTKIDANKWERSILMNAGPSMQHPPRGGQLTPFAHQLASNKLRDTIAGPSFISQPAADEGSRTGIKGPGILSSINTAATANDKISSAVLLSGSRPKPLTNIIESSTPPSSQHGITPASRQMTIFYGGQAHVFDDVHQHKADVIMALAGSNGGSWSTAFSPKSTAKLVNDSTLHSGENETGLVSNVAFPQELHGKLSATGSSSRAVGPVDRVSTPAGVLQGSIFAKDTRNPAVQAADPSSEDKRAQ 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07481 417 MobiDBLite consensus disorder prediction 394 417 - -
Mepo3g07481 417 MobiDBLite consensus disorder prediction 7 27 - -
Mepo3g07481 417 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 354 IPR040390 -
Mepo3g07481 417 ProSiteProfiles Tify domain profile. 286 321 IPR010399 -
Mepo3g07481 417 MobiDBLite consensus disorder prediction 1 93 - -
Mepo3g07481 417 Pfam tify domain 288 320 IPR010399 -
Mepo3g07481 417 SMART tify_2 286 321 IPR010399 -
Mepo3g07481 417 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07481 Mepo-Chr3 88147766 88152653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07481 28 319 Tify Gene Family AT4G32570 39.871 2.59e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Mepo3g07481 tify 5.9e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07481 - - gmx:100807222 626.706