Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07479 ATGGCTTCTAATTCACGGGATTCTTCACCAGCCTCTGGTCATAATGGTGTACCTGGCTCTGGCTCTGGCTCTGCTGGAGGTTATGATGCTGATTCCTCTGGCTCTTCTGCTGGTGGTTATGATGAGTCAGACCCTTCAGACCCTTCTTTTTCTGACCCTTCTGACCCTTCTTTTTCTGACCCTTCTCTTTCTTCTCCTTCAAGTTTTTCTTCTTTTGATCTAAATAATCTTTTTGACCCTTCTTTTTCTTTTGATTTTGAGATACCTTCACCTGGTCCTGAATTCAACAATCCTGGTGATGGTGGTGGGTCTACTTCAAGTTTTTCTTCATCTGATCTAAAGAATATTGAAATACCTTCACCTCCTCCACCTCCTCCCGAATTCAATCCCTATGCGATCATTCTACTTCAGGCACGAGAGCTTGTTGAATGGGTCAATTCCAATGGCGAAGTGGACACTACATCTATGAATTGGTGTCCCAAGGGCCACGACTCTGACCTTTCCTCTGATGAAGAGAAGATACAAGCTCTGAAAACACAAAGGCATCTCCGTTCTATGAATTGGATATTAGAATGCGATGAAGAAAACAAGATTTCTTATATATCACCCCATGATCACAGCAAACATTGTCTCAGAGATGCGGGTCTCATCGAACTTCAAAAAAATAGGTTGTTTTGCCTGATAGAAGCACACGGTGATGATATGAAAGGAATGTCTGTTGATGCATTAGAAAACATTATCAAGAATTACTGCCTTCTTTGTGATGCTGAAGCCAAAGGTGTCCTTGGTGCAAATCGCCCGTTTTGTAATGACTCTTGTCAAGAAACTTTCTCCTCTCTTAAGGACTTATTTGGGAAAGAGAACGTTGTCGAGACGGTTGCCGGTGATCCATCAATAGCAACTTGGAAAATAATGAAAGTTGACAACAACATTGATCATCAAGATCTAACAACGTTTGAAGAAGCTGCAGCGCTACTAACGTCTACCTTTGGTCATAGGAAGAAAGAGTTTGTTAGTAGTATTGCCTTTAGTGCTGGCTCTTTTAGCGGATTTTGCAACTTCATCGTGTTCAAGGATGGTGAATTGGCTTCCCTGGCCACGTTTAGGATACATGCAAGAAACACAAAGGTCGTTGAAATCCCCTATGTGGCCACCGATCCAAAATTCAGATGTAAGGGAATGTGTAAGATGCTTATGAACAATCTGGAAAAGTGTTTAATTGAAGTGTTAGGTGTGAAGAACTTAATACTGCCTTCACTTGATGATACAATACCTATGTGGGAGCAACACTTTGGATTTCATCGCATCACATACGAGGAGCTCCAAGATCTATTTGAAGACCATAACAGCAACACTATTTTAGAATTTGACGGCACAACAATTTGTCATAAAGTCTTAACTTTGTAG 1407 0.4122 MASNSRDSSPASGHNGVPGSGSGSAGGYDADSSGSSAGGYDESDPSDPSFSDPSDPSFSDPSLSSPSSFSSFDLNNLFDPSFSFDFEIPSPGPEFNNPGDGGGSTSSFSSSDLKNIEIPSPPPPPPEFNPYAIILLQARELVEWVNSNGEVDTTSMNWCPKGHDSDLSSDEEKIQALKTQRHLRSMNWILECDEENKISYISPHDHSKHCLRDAGLIELQKNRLFCLIEAHGDDMKGMSVDALENIIKNYCLLCDAEAKGVLGANRPFCNDSCQETFSSLKDLFGKENVVETVAGDPSIATWKIMKVDNNIDHQDLTTFEEAAALLTSTFGHRKKEFVSSIAFSAGSFSGFCNFIVFKDGELASLATFRIHARNTKVVEIPYVATDPKFRCKGMCKMLMNNLEKCLIEVLGVKNLILPSLDDTIPMWEQHFGFHRITYEELQDLFEDHNSNTILEFDGTTICHKVLTL 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07479 468 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 344 440 IPR016181 -
Mepo3g07479 468 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 309 459 IPR000182 GO:0016747
Mepo3g07479 468 PANTHER PHD FINGER PROTEIN 12 264 467 IPR042163 GO:0003714|GO:0045892
Mepo3g07479 468 MobiDBLite consensus disorder prediction 1 70 - -
Mepo3g07479 468 Pfam Acetyltransferase (GNAT) family 335 433 IPR000182 GO:0016747
Mepo3g07479 468 Gene3D - 300 460 - -
Mepo3g07479 468 MobiDBLite consensus disorder prediction 26 70 - -
Mepo3g07479 468 MobiDBLite consensus disorder prediction 88 125 - -
Mepo3g07479 468 MobiDBLite consensus disorder prediction 99 116 - -
Mepo3g07479 468 CDD NAT_SF 354 417 - -
Mepo3g07479 468 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07479 Mepo-Chr3 88140182 88141689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07479 242 466 PHD Transcription Factor Family AT5G63900 28.390 9.60e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Mepo3g07479 Acetyltransf_1 3.3e-08 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07479 - - lang:109342495 102.064