Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07460 ATGATGTATGAAAGCTACAACGACGATGATGCCTTAGATCATGAGAGAAATATGAACATGATGGAAAATCAAAATGGAGATGGAGTTCTCCCGGAACACGATGATGGCAGCATGTACAGCCTCACCGGCGGAGCTCCACTTCCGCCTCTAGGCGATTTCGGTGCCAGAAGAACCAAACTCCGTAAAAGAACCATCTCCCCCAATGACCGTCGCTACAGATGGTGGCAGATGTTTTTGGTGGTGTTAGTGTTCTACACTGCATGGGTATCACCATTTGAATTCGGGTTCTTGAAAGAACCTTTGAGACCTCTTTCAGTTACTGATAATGTAGTGAATATAATATTTTTCTTTGATATTTGGTTAACCTTCTTTGTTGCTTACTATGACAAAACTACGTATTTGCTTGTGGATAGGCATGGGCCTATTGCAAGGAGATATCTAAAAACATGGTTTCTATTTGATCTCGTTTCCACTATTCCTTATGAACTCACCGACAGATTATTTCCTACTCTCGATACTTATGGCTACTTCGGTATGCTTCGCCTTTGGCGTCTCCGCAGGGTCAGTGCCATGTTTGCAAGATTAGAAAAGGATAGACATTATAACTACTTCTGGTTGCGGTGTTCAAAGCTTATTTGTGTTTCTCTATTTGTAGTACATTTTGGAGCCTGCATTTTCTACTTTCTTGCCGACCATTATGCTAAAGACCTAAGCACAACGTGGCTTGGGCTTGTTCCTGACACGGTTGACAAGAATACGATGTCTCTCTACGTAACATCAGTATACTGGTCCATTATCACTGTTTCATCAGTTGGTTATGGTGATCTGCATCCTGTAAATACAAGGGAGATGATATTTGACATTTTCTATGTACTCTTTAATCAGGGACTTATTGCATACATCATTGGAAACATGACAAATTTAGCTGTTCATGTCACAAGCAGAACTAGGCAATATAGGGACACAATACAAGCTGCCACAAATTTTGCCCGCCGGAATAAGATACCTATCCACTTGGAAGAACAGATGCTTTCTCATTTGTTCATGAAGTACCGAACCGATTTGGAAGGAGTGCAGCAACAAGAGATTATTGATTCCCTTCCAAAAGCTATTCGATCTAGTATCTCATACTACTTATTCTATTCAATGATGGACAACGTATACTTGTTTCAGGGAGTGTCAAAAGACCTAATTTTTCAATTGGTCACGGAGATGAAGGCGGAGTATTTTCCTCCAAAGGAGGATGTGATTTTGGATAATGAAGCACCAACAGACTTTTATATTTTTGTCACCGGTGCCGCGGAACTTATCAAACGGGTGAATGGAGTAGAAGAGGTCGTTGGTAAGGTACATGCAAGAGATCTTGTTGGTGAAGTAGGAGTTCTATGTTACAGGCCGCAGCCGTATACAGTCCGGACTAAACGATTGAGCCAAATTTTGCGCTTGAGTCGTGCTACATTTCTAAATATTCTTCATTCAAATGCTGGAGATGGGGCAATAATCATGAACAACTTTCTAAATCATTTGCAAACTTCCGAGATTCCAGGGTTGGATGCTATTTTGGTAGAAACAGAGGCCATGTTGGCTCGTGGTAAAACGGATCTACCTATCAGCACATGCTTTGCAGCAAGCAGAAGTGACAAACAACTGCTACAACGGTTGCTGAAGAAGGGCTCAGATCCAAATGAAACAGACAGGAATGGAAGAACAGCACTGCATATCGCAGCTTCTAATGGTAATGAGAGTTTTGTAACTCTGCTTCTACAGTCTGGTGCTGATCCAAATACCAAAGATTTGGATGGAAATATCCCACTATGGGAAGCAATGATTGGTAGACATAAATCTGTCAAGAAAATACTCATAGACAAGGGTGCAGACATATTTTGTGCTGATGCAGGGCATCTAGCATGCTCTGCAGTTGATAAAAATAGCATTGAATTGCTTAAGGAACTCAAAGAACTCGGTGTGGATGTGACAAAACCCGAAATGAGCGGAATCACTGCCCTGCATAAAGCAGTAAGTGACGGAAATGTAGAGATGGTAAAGTTCCTTTTGGACCTAGGAGCTGAAGTTGATATGCAAGATGGTTATGGCTGGACTCCAAGGGCTTTGGCAGAACAACAAGGCCACGGCGAAATTAAAAATATATTCCAAAACATTAAAGAAAACAAACAAATAGCACCTGTTAGTCCAATACCAGAAGATGGTATGCCTAATGTGTCGTCCATCGGAAGGTTTCAAAGTGCACCCGTTATGCCTGATGCTCGTGGGTCCCTAGATAACATGCTACAACCACCTAATCAAGAAGAGTTGCCGTGGCTAGATAGTCATCGGAGGCGAAGGGCCAACACCTTTCATAATTCAATTTTCGGGATGATATCTGCTGCCAATTACAATAAAAAAGATCTTGGGGTATCTGAAAGCAGAATCACTGATACTGCGAACATGAATGGAATGGTAGCTAGAGTGACACTTATTTGTCCAGAAAAAGGTGAACATGCTGTAAAGCTTGCTTTTCTGCCCAATTCCCTTGAAGAACTGCTAGACATTGGTGCCAAAAAGTTTGATTTCTCACCCACCAAAATTTTGACCAAAGAAGGAGCTGAAATTGACGATATAGATCTTATAAGAGATGGTGATCATCTTATTATTGCAAGTGACTGA 2664 0.4144 MMYESYNDDDALDHERNMNMMENQNGDGVLPEHDDGSMYSLTGGAPLPPLGDFGARRTKLRKRTISPNDRRYRWWQMFLVVLVFYTAWVSPFEFGFLKEPLRPLSVTDNVVNIIFFFDIWLTFFVAYYDKTTYLLVDRHGPIARRYLKTWFLFDLVSTIPYELTDRLFPTLDTYGYFGMLRLWRLRRVSAMFARLEKDRHYNYFWLRCSKLICVSLFVVHFGACIFYFLADHYAKDLSTTWLGLVPDTVDKNTMSLYVTSVYWSIITVSSVGYGDLHPVNTREMIFDIFYVLFNQGLIAYIIGNMTNLAVHVTSRTRQYRDTIQAATNFARRNKIPIHLEEQMLSHLFMKYRTDLEGVQQQEIIDSLPKAIRSSISYYLFYSMMDNVYLFQGVSKDLIFQLVTEMKAEYFPPKEDVILDNEAPTDFYIFVTGAAELIKRVNGVEEVVGKVHARDLVGEVGVLCYRPQPYTVRTKRLSQILRLSRATFLNILHSNAGDGAIIMNNFLNHLQTSEIPGLDAILVETEAMLARGKTDLPISTCFAASRSDKQLLQRLLKKGSDPNETDRNGRTALHIAASNGNESFVTLLLQSGADPNTKDLDGNIPLWEAMIGRHKSVKKILIDKGADIFCADAGHLACSAVDKNSIELLKELKELGVDVTKPEMSGITALHKAVSDGNVEMVKFLLDLGAEVDMQDGYGWTPRALAEQQGHGEIKNIFQNIKENKQIAPVSPIPEDGMPNVSSIGRFQSAPVMPDARGSLDNMLQPPNQEELPWLDSHRRRRANTFHNSIFGMISAANYNKKDLGVSESRITDTANMNGMVARVTLICPEKGEHAVKLAFLPNSLEELLDIGAKKFDFSPTKILTKEGAEIDDIDLIRDGDHLIIASD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07460 887 Pfam Ankyrin repeats (many copies) 667 701 IPR002110 GO:0005515
Mepo3g07460 887 ProSiteProfiles Ankyrin repeat profile. 600 632 IPR002110 GO:0005515
Mepo3g07460 887 FunFam Potassium channel KAT2 377 513 - -
Mepo3g07460 887 Pfam Ion transport protein 72 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo3g07460 887 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo3g07460 887 PRINTS EAG/ELK/ERG potassium channel family signature 257 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo3g07460 887 PRINTS EAG/ELK/ERG potassium channel family signature 283 294 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo3g07460 887 PRINTS EAG/ELK/ERG potassium channel family signature 301 310 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo3g07460 887 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo3g07460 887 ProSiteProfiles cAMP/cGMP binding motif profile. 389 508 IPR000595 -
Mepo3g07460 887 SUPERFAMILY Ankyrin repeat 541 718 IPR036770 -
Mepo3g07460 887 ProSiteProfiles Ankyrin repeat region circular profile. 567 598 - -
Mepo3g07460 887 Gene3D - 536 719 IPR036770 -
Mepo3g07460 887 PRINTS Ankyrin repeat signature 568 583 IPR002110 GO:0005515
Mepo3g07460 887 PRINTS Ankyrin repeat signature 680 694 IPR002110 GO:0005515
Mepo3g07460 887 ProSiteProfiles Ankyrin repeat profile. 567 599 IPR002110 GO:0005515
Mepo3g07460 887 ProSiteProfiles Ankyrin repeat profile. 664 696 IPR002110 GO:0005515
Mepo3g07460 887 Pfam Cyclic nucleotide-binding domain 409 494 IPR000595 -
Mepo3g07460 887 FunFam Potassium channel KAT3 74 311 - -
Mepo3g07460 887 SUPERFAMILY cAMP-binding domain-like 314 509 IPR018490 -
Mepo3g07460 887 ProSiteProfiles KHA domain profile. 822 887 IPR021789 -
Mepo3g07460 887 Gene3D Helix hairpin bin 311 379 - -
Mepo3g07460 887 Gene3D Jelly Rolls 381 514 IPR014710 -
Mepo3g07460 887 Pfam KHA, dimerisation domain of potassium ion channel 822 884 IPR021789 -
Mepo3g07460 887 SUPERFAMILY Voltage-gated potassium channels 67 308 - -
Mepo3g07460 887 PANTHER POTASSIUM CHANNEL AKT1 40 885 IPR045319 GO:0005249|GO:0006813
Mepo3g07460 887 Pfam Ankyrin repeats (3 copies) 541 628 IPR002110 GO:0005515
Mepo3g07460 887 SMART cnmp_10 389 506 IPR000595 -
Mepo3g07460 887 SMART ANK_2a 664 693 IPR002110 GO:0005515
Mepo3g07460 887 SMART ANK_2a 631 660 IPR002110 GO:0005515
Mepo3g07460 887 SMART ANK_2a 600 629 IPR002110 GO:0005515
Mepo3g07460 887 SMART ANK_2a 534 563 IPR002110 GO:0005515
Mepo3g07460 887 SMART ANK_2a 567 596 IPR002110 GO:0005515
Mepo3g07460 887 CDD CAP_ED 389 502 IPR000595 -
Mepo3g07460 887 Gene3D - 74 310 - -
Mepo3g07460 887 ProSiteProfiles Ankyrin repeat region circular profile. 664 695 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07460 Mepo-Chr3 87962415 87967907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07460 35 887 Ion Channels AT2G25600 55.504 0.0 941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07460 3 87962415 87967907 Mepo3g07460 3 87962415 87967907 ECH
Mepo4g00649 4 8821988 8827932 Mepo3g07460 3 87962415 87967907 PCT