Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07454 ATGAAGGCTACGACTAAGAAAAAGAATCCCCTGGTGTTTATGGATGTATCTATCGATGGGGATCCCGTTAAAAGGATGGTTTTTGAGCTTTTCCATGATGTTGCTCCCAAGACTGCAGAAAATTTCCGTGCATTATGTACAGGAGAGAGAGGTATCAGTTCAAATACTGGAAAATTGCTTCACTACAAGGGTTCTTTTTTCCATCATATTATGAAAGGCTCCATCGTGAAGGGTGGTGATTTTGTCAATCGTAATGGCACTGGTGGAGAAAGCATATATGGTTCAAACTTTCCTGATGAGTCACCTAGGCTAAAGCATGATGGCCCTGGGCTTTTGTCAATGGCAATTGCTGACCGTGATAAGCTTGGTTCTCATTTTATTATCACTTTGAAAGCTGATCACCATCTTGATAGGAAATATGTAGTCTTTGGGAGGCTTGTTGAAGGGCTTAAGGTATTGAAGAAAATTGAAGATGTTGGTGATGATGAAGGGCATCCAACTGTAACTGTTAAAATTATTAACTGTGGTGAATATAATGAGGATGGGAAGAAGGTAAATAAATCAAAAACAGGAAAGGATGGAGCCAATGAAGGCAATAATCTTGAAACACGGAGGAAGGGAAAGCTCAAGAGGTCTTCAAAAGACAGAAGGAAAAGGAAAAGATACCACTCATCTGAATCGGAGAGTTCTTCAGATTCAGACATGGAATCTTCGGAAACTGATAGTGATTCCGACTCAGATATGTCCTCATCATCTGATATAAGTTCATCTAGTGATGACAGGCGAAGAAAGAGAAAGAGATCCAAGAAAGATAAATATAAACGTGGAAAAAGAAGAGATAAACGCCGTGACAAAAGGCGAAGAAGACGGGATAAGAGATCGAAGCGCAGATCAAAAAGGGAATCTGGCAGTGATTCAGATAGCGAGAGTAGCAGTAGCTCTGATACTGAAAGCCTTGATACTCAACAGGAAGAGCTGAAGCGAAAAGATCGTTATCAGAAAAAAGCTGAACTGAAGTCTCCCTCAGTTGTGGAGAAAGATGCACCCGCCATTCATCATAGAAAGGAAGAGGCGGGTATGCCAGCGAGCAATGAAAAAACCGTGAAGGAAAATGGAGAGCGGCATAGCAATGGTCCTGGAGCTGCCTATAGATCTGACAGAAGTGAAGAGAGGCAGCCTGACGTGATGGATGTTCATTTGGGCAAATCTAGGAGTCGAAGCACAAGCCCTAAGCGACCCATGAGTAAGAGTATGAGTATTAGTCCTAGGAGGAGTAGGAGCAAGAGCCGGAGCATTTCCCCAAAAAGAAGATTGAGAAAAAGTCCAAGTGTCAGTAGAAGCCCTCCTCGTCTATCAAGGAGGAGTTTGAGCAGTAGTCCTGTCAGAAGCATGGACAGGAGTCCTGTTAGGAGCATCGGTAAGAGTCCTGTTAGAAGCATTGACAGGAGTCCAAGGAGAAGCATCGGCAGGAGCCCGGTGAGGGGCAGGAAGGGGAGAAAGGTCAGTAGAAGTCCTGTGATAACTCGTCCTCTTAAAAGTGTCAGCAAGAGCCCTGTAAGATCCCGCCGGAGCAGGAGTTCTCCCAGAGTATCATCACGAAAGAGCGTAAGTCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCCCTGTAAGAGTGTCAAGAAAAAATTTAAGTCGCAGTCCATTAAGGAAGAGCTTAAGTCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGTTGCAGTCCAGTTAGAGCGCCTGCAAGAAGCTTAAGCAGAAGCCCTGTAAGAGTGTCAAGAAAGAGCATAAGTCGCAGTCCAGTTAGAGCACCTGCAAGAAGCTTAAGCAGAAGTCCTGTAAGAGTGTCAAGAAAGAGCATAAGTCGCAGTCCAGTTAGATCACCTGCAAGAAGCTTAAGCAGAAGCTCTGGCAGGGTCCCCTCAAAGAGAAGCATTAGCCGAAGTCCTGTCAGGGCACCCAGTAGAAACAATCGCCGCAGTTATTCTAGGAGTCCTAGCCCTGTACGTAGGAGAAGAACACCTCGTGGGGGTAGTTTGTCTAGAAGTGCTTCACCTGATGCTTCGCCAAAGCGTATCAGAAGGGGAAGAGGTTTCAGTGAACGATACTCCTATGCAAGAAGGTATAGAACCCCTTCCCGGTCTCCTGTGAGGTCATACCGATACAATGGAAGAATTGATCGTGACAGATATTCAAGTTACAGAAGGTATTCTCCTAGGCGTTTCAGAAGCCCACCACGGGGAAGAACTCCTCCAAGGTACCGAAGGAGAAGCCGATCACCATCTGTTTCGCCCAGCCCACGCTACCGAGCTCGAAGATATAGCAGAAGCCGCAGCCCAGTTCGCATTCGCTCCCCAGTTCGGAGCACTTCCCCCGATCGATCTCGCCTCTCTCCTCGTGCAGAAAGGCATTCTTCGTACTCCCAGAGCAGAAGTCCAGTGAAATCTAGGTCTTCTGTAAAATCACCATCTCCACGAAAAGCAAGTAGAGACAGGTCAGCTTCATCATCCAGAAGCCCAGATGGAAAGAGAGGTTTGGTCTCATACGGCGATGGTTCTCCTGACTCGGGCCAAAGGTGA 2640 0.4621 MKATTKKKNPLVFMDVSIDGDPVKRMVFELFHDVAPKTAENFRALCTGERGISSNTGKLLHYKGSFFHHIMKGSIVKGGDFVNRNGTGGESIYGSNFPDESPRLKHDGPGLLSMAIADRDKLGSHFIITLKADHHLDRKYVVFGRLVEGLKVLKKIEDVGDDEGHPTVTVKIINCGEYNEDGKKVNKSKTGKDGANEGNNLETRRKGKLKRSSKDRRKRKRYHSSESESSSDSDMESSETDSDSDSDMSSSSDISSSSDDRRRKRKRSKKDKYKRGKRRDKRRDKRRRRRDKRSKRRSKRESGSDSDSESSSSSDTESLDTQQEELKRKDRYQKKAELKSPSVVEKDAPAIHHRKEEAGMPASNEKTVKENGERHSNGPGAAYRSDRSEERQPDVMDVHLGKSRSRSTSPKRPMSKSMSISPRRSRSKSRSISPKRRLRKSPSVSRSPPRLSRRSLSSSPVRSMDRSPVRSIGKSPVRSIDRSPRRSIGRSPVRGRKGRKVSRSPVITRPLKSVSKSPVRSRRSRSSPRVSSRKSVSRSPVRSPARSLSRSPVRVSRKNLSRSPLRKSLSRSPVRSPARSLSRSPVRVSRKSISCSPVRAPARSLSRSPVRVSRKSISRSPVRAPARSLSRSPVRVSRKSISRSPVRSPARSLSRSSGRVPSKRSISRSPVRAPSRNNRRSYSRSPSPVRRRRTPRGGSLSRSASPDASPKRIRRGRGFSERYSYARRYRTPSRSPVRSYRYNGRIDRDRYSSYRRYSPRRFRSPPRGRTPPRYRRRSRSPSVSPSPRYRARRYSRSRSPVRIRSPVRSTSPDRSRLSPRAERHSSYSQSRSPVKSRSSVKSPSPRKASRDRSASSSRSPDGKRGLVSYGDGSPDSGQR 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07454 879 MobiDBLite consensus disorder prediction 384 401 - -
Mepo3g07454 879 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 4 185 - -
Mepo3g07454 879 SUPERFAMILY Cyclophilin-like 5 179 IPR029000 -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 445 465 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 822 843 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 708 728 - -
Mepo3g07454 879 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 67 79 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 30 45 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 137 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 138 153 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 12 177 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 320 373 - -
Mepo3g07454 879 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 14 176 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 MobiDBLite consensus disorder prediction 262 297 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 741 756 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 407 427 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 428 443 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 489 503 - -
Mepo3g07454 879 Gene3D - 1 178 IPR029000 -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 760 776 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 180 879 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 530 591 - -
Mepo3g07454 879 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 13 177 IPR002130 GO:0000413|GO:0003755
Mepo3g07454 879 MobiDBLite consensus disorder prediction 844 858 - -
Mepo3g07454 879 MobiDBLite consensus disorder prediction 633 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07454 Mepo-Chr3 87908613 87916123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07454 29 173 U-box Gene Family AT5G67530 40.136 3.29e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07454 K09566 - gmx:100785820 343.584