Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07396 ATGAAGCTTCTTGTTCTTCTTATGCTTCTCATGGTACTTCTTCTTATTCTTATTTTGAGTTTCATATGTTTATGGATTTACTACAACAACTATTCATCAAAATACAAAAGGAAAAATGTTCAAAACTCAGATGCAGAGAAGGGGTGTGTTCCAATAATTGATTACAAGCAAATAGAAAAGTCGACCAATAATTTTCAGGAAAGTAACATCTTGGGTATAGGTGGTTTTGGATGTGTTTACAAGGCACAATTTGATGATAATCTGGATGTTGCTGTCAAGAAACTACACTGCCAAACACAAAATGCTGAGACAGAATTTGAGAATGAGGTGGATTTATTGAGTAAAATTCAGCATCCAAATATAATTTCTTTACTCGGTTGTAGCATTAATGGAGACATGAGATTTATTGTGTATGGGTTAATGCAAAATGGATCCTTGGAAGCTCTATTACATGGACCATCTCATGGCTCAGGATTGACTTGGCATATGAGAATGAAGATTGCTCTTGACACAGCAAGAGGATTAGAATATCTACATGAGCATTGTTACCCTCGGGTGATTCATAGAGATATGAAATCTTCAAATATTCTTTTAGATGCAAACTTCAATGCCAAGCTCTCTGATTTTGGTCTGTCCATAATTGATGGGTCCCAAAAGAAGAACATCAAGGTTTCAGGAACACTGGGATACGTAGCCCCAGAATATCTTTTAGATGGTAAATTGACTGATAAAAGTGATGTGTATGCCTATGGGGTTGTACTCCTGGAGCTCCTGTTTGGAAGGAAACCTGTAGAAAAACTGGCACCAGCTCAGTGCCAATCCCTTGTCACATGGGCCATGCCTCAGCTCACAGACAGGTCCAAACTTCCAAACATTGTGGATCCAGTCATAAAGAATACAATGGATCTCAAGCATTTATACCAGGTCGCTGCGGTGGCTGTGCTATGTGTGCAACCAGAGCCAAGTTACCGGCCACTAATCACAGATGTTCTTCACTCACTCGTCCCTCTTGTTCCAGTTGAGCTTGGAGGAACACTCAGAGTGACACAATATCAAACCGATCCGTCTATGAGTTTGAGCCAGGGATAG 1089 0.3985 MKLLVLLMLLMVLLLILILSFICLWIYYNNYSSKYKRKNVQNSDAEKGCVPIIDYKQIEKSTNNFQESNILGIGGFGCVYKAQFDDNLDVAVKKLHCQTQNAETEFENEVDLLSKIQHPNIISLLGCSINGDMRFIVYGLMQNGSLEALLHGPSHGSGLTWHMRMKIALDTARGLEYLHEHCYPRVIHRDMKSSNILLDANFNAKLSDFGLSIIDGSQKKNIKVSGTLGYVAPEYLLDGKLTDKSDVYAYGVVLLELLFGRKPVEKLAPAQCQSLVTWAMPQLTDRSKLPNIVDPVIKNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLVPLVPVELGGTLRVTQYQTDPSMSLSQG 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07396 362 FunFam probable receptor-like protein kinase At1g80640 141 339 - -
Mepo3g07396 362 FunFam Protein kinase superfamily protein 33 140 - -
Mepo3g07396 362 Pfam Protein kinase domain 65 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07396 362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Mepo3g07396 362 Gene3D Transferase(Phosphotransferase) domain 1 141 340 - -
Mepo3g07396 362 SMART serkin_6 65 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07396 362 PANTHER OS01G0750732 PROTEIN 19 338 - -
Mepo3g07396 362 ProSiteProfiles Protein kinase domain profile. 65 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07396 362 CDD STKc_IRAK 71 337 - -
Mepo3g07396 362 Gene3D Phosphorylase Kinase; domain 1 27 139 - -
Mepo3g07396 362 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Mepo3g07396 362 SUPERFAMILY Protein kinase-like (PK-like) 45 334 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07396 Mepo-Chr3 87372632 87376433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07396 4 338 Receptor kinase-like Gene Family AT3G58690 45.763 2.77e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mepo3g07396 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07396 - - gmx:100784795 562.377