Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07395 ATGGCTAGACCACAGCAACGTTACCGAGGCGTTCGACAAAGGCATTGGGGCTCTTGGGTCTCCGAAATTCGCCACCCCATATTAAAAACTAGGATATGGCTTGGTACTTTTGAAACTGCAGAGGATGCAGCTAGAGCATATGATGAAGCAGCAAGACTAATGTGTGGTACAAGGGCAAGAACAAATTTCCCTTACAACCCCAATATGTCACAATCATCATCTTCTAAGCTTCTCTCTGCAACTTTAACTGCTAAACTGCATAGATGTTACATGGCTTCATTGCAAATCACTAGGCCAATATCTCTGCAACAGCCTCAGAAACAATCTTCACAAAGTGTCAACATATCTACAAACAATGTTCCCATGAAAAGTAGCCAAGAAATTGATACTACTATGAAACATGAAGAGGAAAAAGAATCAGAGGGAAATTGGGTTTTCAAGAAAGTTAAAGTGGAGAATTCTCAGCAATTTATTAAGCCTCTTGAAGAAGATCACATTGAACAAATGATAGAGGAATTGCTTCATTATGGGTCTATTGAGCTTTGTTCTGTTTTTCCACCACAGACATGA 570 0.3982 MARPQQRYRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGTRARTNFPYNPNMSQSSSSKLLSATLTAKLHRCYMASLQITRPISLQQPQKQSSQSVNISTNNVPMKSSQEIDTTMKHEEEKESEGNWVFKKVKVENSQQFIKPLEEDHIEQMIEELLHYGSIELCSVFPPQT 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07395 189 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 129 - -
Mepo3g07395 189 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Mepo3g07395 189 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Mepo3g07395 189 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Mepo3g07395 189 FunFam Ethylene-responsive transcription factor 2 6 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07395 Mepo-Chr3 87357230 87358288 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07395 1 189 AP2-EREBP Transcription Factor Family AT5G25190 66.321 1.58e-83 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g07395 AP2 6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07395 - - gmx:100804510 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07395 3 87357230 87358288 Mepo3g07395 3 87357230 87358288 ECH