Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07385 ATGCAATGTGCATATAGTTCATCGGAAATGGCTAAGTGTCACTGGAGCAACGTTGATTCAATTGTTCTCGATCATCGCCACCATGCCAAAAACACCACCGCCGGTAACTTCCGCTTCTCCGCCTCATCCTTCCGCCGCATCATTTTCGACGCCTTAAGCTGCGGCGGAACCTCTCGACATCACCACCGCGAAGAAGAAGTTAGCTCTGTCGCTTCGACGGCAACCGTGAAGGAGTTAAGCGGAGAAGTGCGAGAAGAGAAGACTGAGAAGCTATTGGATCTTCTGAACATACAGGTGCATGAAACGAATGCGGAATTAACGGAGATGAAGCATGTGGTGAAGGATTTACGTGGAGATGACTCGACGAAGCGGCGAATTGCGGCGGCGAGAGTAAGATCACTGACGAAAGAAGATTCCGAATCGAGAGGCACACTCGCAATGCTCGGAGCAATTTCTCCACTCGTTGGAATGCTCGATTCAGAAGATCTTCATTCTCAGATTGATTCTCTCTATGCTTTACTCAATCTCGGAATCGCCAACGATGCAAATAAAGCAGCGATTGTTAAAATTGGTGCTGTTCACAAGATGCTGAAGCTGATTGAATCACCTTGTGTTGTTGATTCATCGGTTTCTGAGGCAATTGTTGCGAATTTCCTTGGATTAAGTGCTTTGGATTCTAACAAACCAATAATTGGATCCTCTGGTGCAATACCCTTCCTAGTTAGAACTCTGAAAAATTTAGGTAATAGTAGTTCTCAAGTTAAACAAGATACTCTTCGGGCTCTTTACAATCTATCGATTAATCAGACAAATATTTCATTTGTTTTGGAAACTGATTTGTTCGCGTTTTTGATAAACTCGATAGAAGATATGGAAGTGAGTGAGAGAGTCCTTTCAATTCTGAGCAATTTGGTGTCGAGTCCTGAGGGTAGAAAAGCTATTAGTGCTGTTAAGGATGCAATCACAGTTTTGGTCGACGTATTGAATTGGACAGATTCACCTGAATGTCAAGAGAAGGCTTCATACATTTTGATGATTATGGCACATAAAGCTTATGCTGATAGGCAAGCCATGATTGAAGCAGGAATTGTATCGTCGTTGCTTGAGCTGACGCTTGTGGGTAGCGCCTTGGCACAGAAAAGGGCATCAAGGATATTACAATGTTTTAGGCTAGATAAAGGGAAGCAGGTTTCTAGAAGAAGTGATGGTGGAAACTTAGGTTTAACTCTCTCTGCGCCTATTTGTGCTTCTTCGTCTTCTTTTGTGAAGACAGATGAAGGAGGTAAAGAGTGTTTAATGGAGGAGGTGAATATGATGAGTGATGAAAAGAAAGCAGTGAAGCAATTAGTTCAGCAGAGCTTGCAGAACAACATGATGAAAATTGTCAAGAGGGCTAACTTGCGTCAAGATTTTGTTCCTTCTGAGCGTTTTGCTTCACTCACTTCAAGTTCAACATCTAAGAGCCTTCCATTTTGA 1476 0.4295 MQCAYSSSEMAKCHWSNVDSIVLDHRHHAKNTTAGNFRFSASSFRRIIFDALSCGGTSRHHHREEEVSSVASTATVKELSGEVREEKTEKLLDLLNIQVHETNAELTEMKHVVKDLRGDDSTKRRIAAARVRSLTKEDSESRGTLAMLGAISPLVGMLDSEDLHSQIDSLYALLNLGIANDANKAAIVKIGAVHKMLKLIESPCVVDSSVSEAIVANFLGLSALDSNKPIIGSSGAIPFLVRTLKNLGNSSSQVKQDTLRALYNLSINQTNISFVLETDLFAFLINSIEDMEVSERVLSILSNLVSSPEGRKAISAVKDAITVLVDVLNWTDSPECQEKASYILMIMAHKAYADRQAMIEAGIVSSLLELTLVGSALAQKRASRILQCFRLDKGKQVSRRSDGGNLGLTLSAPICASSSSFVKTDEGGKECLMEEVNMMSDEKKAVKQLVQQSLQNNMMKIVKRANLRQDFVPSERFASLTSSSTSKSLPF 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07385 491 SUPERFAMILY ARM repeat 108 394 IPR016024 -
Mepo3g07385 491 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 38 491 - -
Mepo3g07385 491 Gene3D - 248 401 IPR011989 -
Mepo3g07385 491 Gene3D - 74 247 IPR011989 -
Mepo3g07385 491 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 235 271 IPR000225 GO:0005515
Mepo3g07385 491 SMART arm_5 180 223 IPR000225 GO:0005515
Mepo3g07385 491 SMART arm_5 307 349 IPR000225 GO:0005515
Mepo3g07385 491 SMART arm_5 268 306 IPR000225 GO:0005515
Mepo3g07385 491 SMART arm_5 224 267 IPR000225 GO:0005515
Mepo3g07385 491 SMART arm_5 138 178 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07385 Mepo-Chr3 87246337 87248366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07385 63 390 U-box Gene Family AT2G23140 30.058 4.30e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07385 - - gmx:100796229 602.438
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00568 4 7926709 7929761 Mepo3g07385 3 87246337 87248366 PCT