Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07381 ATGGAACCAACGTGTGTGGATACTTCTCTTAACCTAAACACTCTCCCTTCTCGGGACACACCTGTTGATGCGGTTGCTGATCAGGTTATGGTTGAAGAGTTGGAGCGTTTAAGTAGTGAGAATAAGAGGTTAACCGAGAAACTGAACCACATGTGCAACAATTATATTGCTTTGCAAAAGCATTTGAGTCAATTCAGTCACACAAATTTTGAAAATGAATTAGTATCACCAATATCGCGGAAGAGAAAGGCCGAGAGCGTTGAAAATTGTATCAATCAGTTTGGCTATGCTATTGCTGAGAGCAGCACCATTACTACTGAGGAGGAGACATTCAAACACAACAACATAATCTCGCCAAAAGTTTCCAAGGTTCTTGTGCCAACAGATGCATCCAATACCAGCTTATATGTGAAGGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTCACCAGAGATAATCCCTCTCCTAGGGCTTACTTCAAGTGTTCCTTTGCTCCTGGCTGCTCTGTGAAGAAGAAGGTATTTAATTATTTGTTTAAGATGAAGGTACAAAGAAGTGTAGAAGACCCAAGCATATTAGTGACCACATACGAAGGAGAGCACAACCATGCGCATCACCAACCTGAAATGTCACTCACTAGTTCAAACCAAAGTGAAACAACCCCTAGATATAACTTAGTTCCAGCATCCTCATCCTCACCAATTAATTGGCCTACAGCTCAAGCTTCAAAGCTTGACTTGGTCCAGCCAAGAAAATTGGTAGTTGATGATTCCCATAAGTCGTCAATCCAGCAGTTATTAGTTCAGCAAATGGCTACTTCTTTGACAAGAGATCCTAATTTCGCAGCAGCACTTGCTACTGCCATTTCTGGAAGAATAGTTCTGGATGTGGAAAAACCGAAGTGA 909 0.4147 MEPTCVDTSLNLNTLPSRDTPVDAVADQVMVEELERLSSENKRLTEKLNHMCNNYIALQKHLSQFSHTNFENELVSPISRKRKAESVENCINQFGYAIAESSTITTEEETFKHNNIISPKVSKVLVPTDASNTSLYVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPGCSVKKKVFNYLFKMKVQRSVEDPSILVTTYEGEHNHAHHQPEMSLTSSNQSETTPRYNLVPASSSSPINWPTAQASKLDLVQPRKLVVDDSHKSSIQQLLVQQMATSLTRDPNFAAALATAISGRIVLDVEKPK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07381 302 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 28 294 IPR044810 GO:0003700
Mepo3g07381 302 Pfam WRKY DNA -binding domain 138 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g07381 302 ProSiteProfiles WRKY domain profile. 132 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g07381 302 SMART WRKY_cls 137 206 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo3g07381 302 MobiDBLite consensus disorder prediction 209 224 - -
Mepo3g07381 302 MobiDBLite consensus disorder prediction 202 224 - -
Mepo3g07381 302 Coils Coil 27 54 - -
Mepo3g07381 302 Gene3D WRKY domain 122 209 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo3g07381 302 SUPERFAMILY WRKY DNA-binding domain 134 206 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07381 Mepo-Chr3 87178839 87182040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07381 6 294 WRKY Transcription Factor Family AT1G80840 44.300 1.94e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo3g07381 WRKY 7.1e-19 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00534 4 7610089 7619674 Mepo3g07381 3 87178839 87182040 PCT