Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07356 ATGGCTTCTAAACTCTGTGACTCATGCAAATCCGCCACCGCAACTCTCTACTGCCGTCCTGACTCCGCCTTCCTCTGCGGTGCTTGTGACTCCAAAGTCCACGCCGCTAACAAACTCGCCTCCCGTCATCCTCGCGTCACTCTCTGCGAAGTCTGCGAACAAGCACCTGCACATGTCACATGTAAAGCTGATGCAGCTTCTCTCTGCATCACCTGCGACCGTGACATCCACACTGCTAATCCTCTCGCCGCACGTCACGAGCGTGTTCCCGTTACTCCGTTCTTCGAATCCAACACTTCTCACTCCGTTAAATCGCTTCCCAACAACAATAACAACTACGATGCTGTTAAAGATGAAGCTGAAGCTGCTTCGTGGTTGATCTCTGATCCGAAAGCAGATCTCAACTCTTCTCCTTATCTCTTCTCTGATTCCGAAGCTATTCCGTTTATGGATCTTGATTACGGTGTAATTGAGCATAAAAACGACGGTGTTGTTCCAGTTCACGGTAACTTCGATACATTTGTTTCACCTTACAAGAACAACAACGTGCACTTGCATACAGAGTTAGAAACACCGTCACAGTCGCAGATTAGTCAGAGTGTTTCGTCTTCGTCAATGGAGGTTGGAGTTGTTCCTGACGGGAACACCGTGCCGGAGATATCAAACTGTGGTTACGGGACGGTGGCGGCGGATCGTGAAGCTAGGGTTATGAGGTATAGGGAGAAGAGGAAGAATAGAAGATTCGAGAAGACGATTCGTTATGCTTCTCGTAAAGCTTATGCGGAAACTAGGCCTAGGATTAAAGGGAGGTTTGCGAAACGCACGGATGCCGTTGATTCCATTTCTGGATACGGCGTCGTTCCCACTTGTTGA 873 0.4891 MASKLCDSCKSATATLYCRPDSAFLCGACDSKVHAANKLASRHPRVTLCEVCEQAPAHVTCKADAASLCITCDRDIHTANPLAARHERVPVTPFFESNTSHSVKSLPNNNNNYDAVKDEAEAASWLISDPKADLNSSPYLFSDSEAIPFMDLDYGVIEHKNDGVVPVHGNFDTFVSPYKNNNVHLHTELETPSQSQISQSVSSSSMEVGVVPDGNTVPEISNCGYGTVAADREARVMRYREKRKNRRFEKTIRYASRKAYAETRPRIKGRFAKRTDAVDSISGYGVVPTC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07356 290 CDD Bbox1_BBX-like 5 48 - -
Mepo3g07356 290 ProSiteProfiles Zinc finger B-box type profile. 1 48 IPR000315 GO:0008270
Mepo3g07356 290 Pfam CCT motif 232 274 IPR010402 GO:0005515
Mepo3g07356 290 ProSiteProfiles CCT domain profile. 232 274 IPR010402 GO:0005515
Mepo3g07356 290 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 6 281 IPR045281 GO:0009909
Mepo3g07356 290 SMART bboxneu5 1 48 IPR000315 GO:0008270
Mepo3g07356 290 SMART bboxneu5 49 91 IPR000315 GO:0008270
Mepo3g07356 290 ProSiteProfiles Zinc finger B-box type profile. 44 91 IPR000315 GO:0008270
Mepo3g07356 290 MobiDBLite consensus disorder prediction 189 208 - -
Mepo3g07356 290 CDD Bbox1_BBX-like 48 91 - -
Mepo3g07356 290 Pfam B-box zinc finger 46 91 IPR000315 GO:0008270
Mepo3g07356 290 Pfam B-box zinc finger 4 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07356 Mepo-Chr3 87013641 87014982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07356 1 289 C2C2-CO-like Transcription Factor Family AT5G24930 53.533 1.81e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mepo3g07356 zf-B_box 4.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07356 - - gmx:100804201 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07356 3 87013641 87014982 Mepo3g07356 3 87013641 87014982 ECH