Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07341 ATGGATCATCATCATCATGTCACCACTGGTCAGATTAAAACTCAATCATCATCTTCTACTTCAAATGGTAATAATGATAATAAGAACGAGAAGAAGTACAAAGGAGTGAGATTTAGAAAGTGGGGGAAATGGGTATCTGAAATAAGGCTACCAAATAGTCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAGAAAGCAGCTAAAGCATTTGATGCTGCACTTTATTGTCTTCGTGGTCGTCATGCAAATTTCAATTTTCCTGATACACCTCTCAATTTGGATATCAATGCACTTTCTAACAATTCACTTACACCACAACAAATTCGAGAGGTTGCTGCAAATTTTGCTAACGAAAACCCACCAATTATTGATAATAATAACAACAATAATGGTAATGTTCAATCCAAAAACGTGACAGAAATTGGTGGCTCTTCATCTTCTACTACTATGTATGATAATGGGAGCACTATTGATTGGACATTTTTGAACATGTTGGATGGTTCAAGTACTCATGATGCTAATTTTGTTGGGTCTGATTATGGTCTATTGTACTCTGACCTAGAGAAGATGCATTCGGGTGAGTTAATGTATTCCATTCCACCACCACTTTTTGAGGATTATCAGAACATATCATCAGTTGAAGAATATGATGATGATAATGACGATCCTTTTTCTCATCAATCATTCCTTTGGAACTGGAACTTCTGA 714 0.3585 MDHHHHVTTGQIKTQSSSSTSNGNNDNKNEKKYKGVRFRKWGKWVSEIRLPNSRERIWLGSYDSAEKAAKAFDAALYCLRGRHANFNFPDTPLNLDINALSNNSLTPQQIREVAANFANENPPIIDNNNNNNGNVQSKNVTEIGGSSSSTTMYDNGSTIDWTFLNMLDGSSTHDANFVGSDYGLLYSDLEKMHSGELMYSIPPPLFEDYQNISSVEEYDDDNDDPFSHQSFLWNWNF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07341 237 CDD AP2 31 91 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 15 166 - -
Mepo3g07341 237 SMART rav1_2 32 95 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 MobiDBLite consensus disorder prediction 1 31 - -
Mepo3g07341 237 Pfam AP2 domain 32 81 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 SUPERFAMILY DNA-binding domain 32 90 IPR016177 GO:0003677
Mepo3g07341 237 ProSiteProfiles AP2/ERF domain profile. 32 89 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 FunFam Ethylene-responsive transcription factor 2 31 90 - -
Mepo3g07341 237 PRINTS Ethylene responsive element binding protein signature 33 44 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 PRINTS Ethylene responsive element binding protein signature 55 71 IPR001471 GO:0003700|GO:0006355
Mepo3g07341 237 MobiDBLite consensus disorder prediction 10 26 - -
Mepo3g07341 237 Gene3D AP2/ERF domain 31 90 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07341 Mepo-Chr3 86880123 86881142 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07341 30 235 AP2-EREBP Transcription Factor Family AT1G19210 44.712 2.77e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo3g07341 AP2 6.6e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07341 - - mtr:11432431 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07341 3 86880123 86881142 Mepo3g07341 3 86880123 86881142 ECH