Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07340 ATGAATGTAACTACTATACTACACATGGATAATCAAATCACTACCGATCAAATTAAAACCTTGTCATCATCATCTTCTACTTCAAGTGGAAATAATGATAATAAGAACGAGAAGAAGTACAAAGGAGTGAGATTTAGAAAGTGGGGGAAATGGGTATCTGAAATAAGGCTACCAAATAGTCGTGAAAGAATATGGTTAGGATCATATGATTCAGCTGAGAAAGCAGCTAAAGCATTTGATGCTGCACTTTATTGTCTTCGTGGTCGTCATGCAAATTTCAATTTTCCTGATACACCTCTCAATTTGGATATCAATGCACTTTCTAACAATTCACTTACACCACAACAAATTCGAGAGGTTGCTGCAAATTTTGCTAACGAAAACCCACCAATTATTGATAATAATAACAACAATAATGGTAATGTTCAATCCAAAAACGTGACAGAAATTGGTGGCTCTTCATCTTCTACTACTATGTATGATAATGGGAGCACTATTGATTGGACATTTTTGAACATGTTGGATGGTTCAAGTACTCATGATGCTAATTTTGTTGGGTCTGAAAATATTGGTGGTTTCTATTCTGACTTAGAAAAGTTGTATTCGGGTGAGTTAATGTATTCCATTGCACCACCGCTTATTGAGGATAATCAAAACGAACTAGTTGAAGAACATGATGATGATGATTATGACCCTTTTTCCCATCAATCATTCCTTTGGAACTGGAACTTTTGA 735 0.351 MNVTTILHMDNQITTDQIKTLSSSSSTSSGNNDNKNEKKYKGVRFRKWGKWVSEIRLPNSRERIWLGSYDSAEKAAKAFDAALYCLRGRHANFNFPDTPLNLDINALSNNSLTPQQIREVAANFANENPPIIDNNNNNNGNVQSKNVTEIGGSSSSTTMYDNGSTIDWTFLNMLDGSSTHDANFVGSENIGGFYSDLEKLYSGELMYSIAPPLIEDNQNELVEEHDDDDYDPFSHQSFLWNWNF 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07340 244 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 SUPERFAMILY DNA-binding domain 39 97 IPR016177 GO:0003677
Mepo3g07340 244 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 MobiDBLite consensus disorder prediction 18 38 - -
Mepo3g07340 244 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Mepo3g07340 244 FunFam Ethylene-responsive transcription factor 2 38 97 - -
Mepo3g07340 244 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Mepo3g07340 244 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 24 171 - -
Mepo3g07340 244 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07340 Mepo-Chr3 86871045 86871779 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07340 37 174 AP2-EREBP Transcription Factor Family AT1G74930 53.571 2.12e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo3g07340 AP2 6.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07340 - - mtr:11432431 360.533