Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07336 ATGGGTGGTGAGGGTAGAGTTGAAGTTGTGAGTGACAAAGGGTGTTCGAGGCTGTTTTCGTCTTCAATCAGAACTCTTCAACCATTGGACCAAATGTCTCCTGTTTCATCCTCTCCGCAATTGCCATCAAATGCTCCTTTTGCTGGTCTTGTTATATGTGTTACTGGTTTATCTAAAGAAGCAAGGAATCAGGTCATGGAAGCTACAGAGAGATTGGGCGGCCAGTATAGCCCCAATCTGCATCCTCAATGTACTCATTTGGTGGTTCAGAGTTTTGGCGGACACAAATTTGAGCATGCGCTGAAGCATGGAACAAAAAATGGTCTCTTTGTTGTCACACTGGGTTGGTTTGTGGATAGTGTCAGGAAAAATGTAAGGTTGACAGAATCACTTTATAGTTTGAAGAGTTATGGGGATAACAATATGAAGTTGGATGATTTTAGACTGCTTCCCGGGTACGCAAATGCTGGAAATTGTCTTCCTTCAAGAATCCATGAAATCAAGCACACTCATCATGCTGAAGAATTTCGAAAATTCTCTGGTACAGAGTCTAACAGAAGTTTGGACTCAAGTTTGTCTGGTTGCTCCATCTACGTTGATCCAGGCATTTCATCCGAATTGCAGAACAAGGTTGCTGAGACTGCATCCAGAGAAGGTGCTAGTTTGGTGGAACAATGGTTTGTTGGCTGCAATGTTAGTCATGTAGTCACTGAAGGGACATCCATTCAAAGATATCTTGGATACTCTAGTAACCTCATTACTCCACTGTGGATTCTCAAAACAGCTAAGGAAAAACAAGTGCAAAGGCTTGTTAGCATGTCTGTTGATTTGGCAAGACAAGTTGGCTTGATGCTTGATGACATTTCTGGGAAGGAAATAGTCAAGCCAAAAGTTCATGACGATCTTCAGGGCAGTAAAAGTGAAATTGGTTACAAAGAAAGACAACAAATTGTAAATTCAGCAAAAAATGGTGTCAGAAGTCGCCGTGGTCGTCGAATGCAGACTTGCCAGACTCCAATCCGTCCGATTACACCTAACAACCTTCTGGACTCTATCTGTTGGTCAATATCGGAAGCAACTTCAACTGCTTCCATTTACACAGACTCTTTCAGTGCTGAAGATCCTAATGAAAATCATACCTCAATATTTTTTGATGCAAAAGGGGATGGGAAGGATTCAGACGCTTCATTTTCACACCCCACACGTCCTCTAACAGAAAGTGAGAAATCCGAGTTGATATTTAAAAACCATTTTCTCACCATACTCTTCCCTCTGGACCGGTTTTCCGAGATCGGCCCTTCCTCAAGAACGTTTTTCAGCCATAACGGTTTTACTTGTCTTCAGGTGTTGGATCATATCCATGCATTTTACCAGGAGAACATGTCAAGCCTTGAAATAGATGTGGCGATTCATACAGATTCAAGACATGCGGACAGGCTTCGATCAGTTTACTCGAGTAAGGAAACAGCGGAGCGTGGGTATGTGATGTTGAAACGAATTGAATTTTTGGGTAGTCGTACGAGTTTTGAAATGTTGAAGCGTGTGAGTGGAGACAACAACTCCAATGTGTATGAGTTATTACTTAGGGCATAA 1593 0.4218 MGGEGRVEVVSDKGCSRLFSSSIRTLQPLDQMSPVSSSPQLPSNAPFAGLVICVTGLSKEARNQVMEATERLGGQYSPNLHPQCTHLVVQSFGGHKFEHALKHGTKNGLFVVTLGWFVDSVRKNVRLTESLYSLKSYGDNNMKLDDFRLLPGYANAGNCLPSRIHEIKHTHHAEEFRKFSGTESNRSLDSSLSGCSIYVDPGISSELQNKVAETASREGASLVEQWFVGCNVSHVVTEGTSIQRYLGYSSNLITPLWILKTAKEKQVQRLVSMSVDLARQVGLMLDDISGKEIVKPKVHDDLQGSKSEIGYKERQQIVNSAKNGVRSRRGRRMQTCQTPIRPITPNNLLDSICWSISEATSTASIYTDSFSAEDPNENHTSIFFDAKGDGKDSDASFSHPTRPLTESEKSELIFKNHFLTILFPLDRFSEIGPSSRTFFSHNGFTCLQVLDHIHAFYQENMSSLEIDVAIHTDSRHADRLRSVYSSKETAERGYVMLKRIEFLGSRTSFEMLKRVSGDNNSNVYELLLRA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07336 530 SUPERFAMILY BRCT domain 40 135 IPR036420 -
Mepo3g07336 530 ProSiteProfiles BRCT domain profile. 187 275 IPR001357 -
Mepo3g07336 530 Pfam Family of unknown function (DUF6699) 353 514 IPR046522 -
Mepo3g07336 530 ProSiteProfiles BRCT domain profile. 42 134 IPR001357 -
Mepo3g07336 530 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 530 - -
Mepo3g07336 530 Pfam twin BRCT domain 50 116 IPR001357 -
Mepo3g07336 530 Gene3D BRCT domain 45 136 IPR036420 -
Mepo3g07336 530 CDD BRCT_TopBP1_rpt2_like 46 124 - -
Mepo3g07336 530 SMART BRCT_7 44 124 IPR001357 -
Mepo3g07336 530 SMART BRCT_7 189 265 IPR001357 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07336 39 134 Core DNA Replication Machinery Family AT1G77320 37.113 7.48e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07336 - - gmx:100815253 882.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07336 3 86828010 86832769 Mepo3g07336 3 86828010 86832769 ECH