Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07330 ATGAGTTCCAAAAAGATTACATGGAAGTCTATTGTCTTGATCTTAGGTTGTTACAAGACAAAATACTCATTAGAAGAACCAGAAAAAAAGGTTTTAAAACAAGGTTCTTTCCAAAGGGTAAGCTTATCTGATATAAGCATTTCTAGCTCTACTACTCAAGCTATTGAGGATCTTTCCATTTCACTAGCTGGTTCAAAGCTTTACACATTTACACTAGAGGAGCTAAGAGAAGCAACACATAATTTTTCAAGGAGTAATTTGCTAGGTGAAGGTGGTTTTGGACCTGTGTATAAGGGTTTTGTTGATGATAAACTCAGACATGGTTTGAAGGCTCAACCTATTGCTGTGAAACGACTCAACTTGGATGGCTCACAAGGTCACAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTTAGACATCCACATCTTGTCAAGCTAATTGGATACTGTTGTGAGGAGGAGCAGAGGCTTTTGGTGTATGAGTACATGACAAGAGGGAGCTTGGAGAATCAATTGTTCAGAAGATACTCTGCTACATTACCATGGTCAACCAGAATGAAAATTGCATTAGGTGCAGCTAAAGGATTAGCTTTCCTGCATGAAGCAGATAAACCTGTAATCTATAGGGATTTTAAAACTTCAAATATATTACTGGACTCGGATTATACAGCTAAACTATCAGACCTTGGATTAGCTAAAGATGGTCCTGAAGGAGAAGAAACACATGTGACAACAACATGCATAATGGGAACGAAAGGCTATGCTGCTCCTGAGTATATCATGTCAGGTCATCTTTCTACCAAGAGTGATGTGTATAGCTATGGAGTAATGTTGTTGGAATTGCTTACAGGAAAGAGGGTAGTGGATAAAAGCAGATCAAATAGGGAGAGAAACCTAGTGGAATGGGCTAGACCTATTTTGAGAGATCAAAGAAAGCTTCCTCATATCATAGACCCAAGATTGGAGGGACAGTTTCCTATTAAAGGAGCTTTGAAGGTTGCTGCATTGACTTATAAATGTTTGAGCCACCATCCTAATCCAAGGCCTAATATGAGTGATGTGGTAAAATCATTGGAATCACTTCAGGACTTTGATGATGTGTTCATAGGACCATTTGTGTATGTGGCTGTTAGTGAAAGTAGCCAATGA 1155 0.3913 MSSKKITWKSIVLILGCYKTKYSLEEPEKKVLKQGSFQRVSLSDISISSSTTQAIEDLSISLAGSKLYTFTLEELREATHNFSRSNLLGEGGFGPVYKGFVDDKLRHGLKAQPIAVKRLNLDGSQGHREWLAEIIFLGQLRHPHLVKLIGYCCEEEQRLLVYEYMTRGSLENQLFRRYSATLPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKTSNILLDSDYTAKLSDLGLAKDGPEGEETHVTTTCIMGTKGYAAPEYIMSGHLSTKSDVYSYGVMLLELLTGKRVVDKSRSNRERNLVEWARPILRDQRKLPHIIDPRLEGQFPIKGALKVAALTYKCLSHHPNPRPNMSDVVKSLESLQDFDDVFIGPFVYVAVSESSQ 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07330 384 FunFam Serine/threonine-protein kinase PBS1 165 369 - -
Mepo3g07330 384 Gene3D Phosphorylase Kinase; domain 1 42 164 - -
Mepo3g07330 384 Pfam Protein tyrosine and serine/threonine kinase 85 360 IPR001245 GO:0004672|GO:0006468
Mepo3g07330 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Mepo3g07330 384 CDD STKc_IRAK 88 363 - -
Mepo3g07330 384 FunFam Serine/threonine-protein kinase BIK1 48 164 - -
Mepo3g07330 384 PANTHER OS01G0588500 PROTEIN-RELATED 52 364 - -
Mepo3g07330 384 ProSiteProfiles Protein kinase domain profile. 82 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07330 384 SUPERFAMILY Protein kinase-like (PK-like) 59 362 IPR011009 -
Mepo3g07330 384 Gene3D Transferase(Phosphotransferase) domain 1 165 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07330 Mepo-Chr3 86777580 86779886 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07330 69 360 Glycoside Hydrolase AT3G07070 51.864 4.61e-101 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo3g07330 PK_Tyr_Ser-Thr 9.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07330 - - gmx:100805771 654.825