Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07309 ATGGATAGTAATAAGAATCAAGGTGGTGGTGAAGTAAGCATGATGGAGAATAGAAGAGAAGTGGTGGTTCCTATTTCAAATGTGAGTGGAGAAACCCAAGATCATGATCATGAGTTGAAAGTTTTTGAATCTTCACCTCGCTACTCTTCGAAGTCACCACCTTTAAACTGTGCTTCCCCTGAAATAAGGTTCATCCCTAGCCCAAATAAGCCCCCAAAAGCTCCTGCTACAAATGCAAACCTTGCTACAAGAAAATCTTTTAAAAGATCAGTGTATTCTAAGCCCAAATCAAGATTTGGTGAACAACCTTATCCTATTGATGAAACCCTTTTAGAAGAGAATGTTACTTATTCAAATTTGCAAGAACATTTATCTGTTACTTCACCTTATAGGAACGCATTTAATAAAGCATCACATTCACCGAATAACAAGTCCGGAACGGTGAATCGATCTGTTTCGATTACTTCCGTCGTCACTCCTAGAACACCTTTGATGGCATCTCCAGGTCCTGCTGGTGAGGATCTTGATGAAATCATTTACAGGAAAGTTGAATCCAGTAGAGGCAAGCGTAAGAGACTAACGACAAAAGTCTTGATTGAATTGTTCGTTTTTGTATGCATCGCGGGTAGCTTGTTGGCTAGTTTAACGGTTGTGAAACTGAGAAGGACAGAGCTTTGGAGTTTAAGGCTTTGGAGGTATTGTATGCTTGTGATGGTGACATTTTGTGGCATGTTAGTTACCAAATGGTTCATGCACATTCTTGTTTTCTTGATTGAAATGAACTTTTTGTTGAGGAAAAAAGTACTTTATTTTGTCCATGGATTGAAGAAATGTGTCCAGGTTTTCATTTGGATCAGTTTGGTTCTCCTCACATGGGTGCTTTTAATCAATCGTGGGGCCCATCGATCAAAATTGGCCGCAAGGATTTTGAATGATATAACATGGACTCTTGTTTCCCTTCTCATTGGAGCATTTTTGTGGGTTATAAAGACATTGTTGCTAAAGGTTTTGGCATCGAGTTTCCATGTTAAATCTTTCTTTGATCGAATTCAAGAATCAATCTTCCATCAATATGTTCTGCAGACTCTCTCTGGGCCTCCACTTATGGAAGAGGCTGAGAAGATAGGCGGAACTCAAAGTATTGGTCATTTTAGTTTCAGGAGTACTACCGCTAATGGCGGCACAAAGAAAGACATTATTGATATGGCAAAGCTTCACAAGATGAAGCAAGAGAAAGTTTCCTCGTGGACTATGAAGATTTTGGTAGATGCAGTAATGAATTCAAGGCTGTCCACAATCTCTAATTCACTAGATGAAAGTTTTTATGATGTAGAAAATGAACCGAATGATAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTACATTTTCAGGAATGTTGCTGCTTCCCCTAGCTGCCAGGACATTGATGAGAATGAACTCCGTCGTTTCATGATTAAGGAAGAAGTTCCTTTGGTATTTCCCCTACTGGCACAGTCAGAGACAGGGCTCATTACCAGAAAGTCTTTAGCAGATTGGGTGTTGAAGGTTTTTCAAGAACGTAAAGCACTGGCACACGCTTTAAGTGACACTAAAACAGCTGTAAAACAATTGAACAAGCTTGTGACAGGGGTCCTAGTAGTGGTGACCATAGTAGTGTGGCTTCTTCTAATGGAGATTGCGACAACAAAAGTACTTGTATTCCTCTCATCGCAGCTAGTACTCGCGGCTTTCATGTTTGGAAACACGTGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCGTTTGATGTTGGCGATCGGTGTGTTATAGATGGTGTTGAGCTATTGGTTGAAGAGATGAATATATTGACAACAGTATTCTTGAAGCTTAATAATGAAAAGTTGTATTATCCAAACTCCGTCCTCGCCACTAAACCGATTAGCAATTATTACAGAAGCCCAAATATGGTTGACAAGGTAGAGTTCTCGGTTGATTTCACAACACCAGCAGAGAAAATTGGGGCACTGAAAGAAAAAGTAAAGAGGCATTTGGAGAGGAATCCACAATACTGGCATCCTAATTTCGGCTTGGTAGTGAAGGAGATTGAAAATGTAAATAATATTAAGATGGGTCTTTTTGTTACTCACACAATGAACTTTCAAGAGTTTGGAGAGAAGACCAAGCGGAGAAGTGAACTGGTGATGGAAGTAAAGAAAATATTTGAAGAGCTCAATATCAGATACAACCTTCTTCCACAAGGTGTTCATCTTAGACACATGGAACCTGACACAAGTTATCTCAAATGA 2310 0.3948 MDSNKNQGGGEVSMMENRREVVVPISNVSGETQDHDHELKVFESSPRYSSKSPPLNCASPEIRFIPSPNKPPKAPATNANLATRKSFKRSVYSKPKSRFGEQPYPIDETLLEENVTYSNLQEHLSVTSPYRNAFNKASHSPNNKSGTVNRSVSITSVVTPRTPLMASPGPAGEDLDEIIYRKVESSRGKRKRLTTKVLIELFVFVCIAGSLLASLTVVKLRRTELWSLRLWRYCMLVMVTFCGMLVTKWFMHILVFLIEMNFLLRKKVLYFVHGLKKCVQVFIWISLVLLTWVLLINRGAHRSKLAARILNDITWTLVSLLIGAFLWVIKTLLLKVLASSFHVKSFFDRIQESIFHQYVLQTLSGPPLMEEAEKIGGTQSIGHFSFRSTTANGGTKKDIIDMAKLHKMKQEKVSSWTMKILVDAVMNSRLSTISNSLDESFYDVENEPNDKEITNEMEATAAAYYIFRNVAASPSCQDIDENELRRFMIKEEVPLVFPLLAQSETGLITRKSLADWVLKVFQERKALAHALSDTKTAVKQLNKLVTGVLVVVTIVVWLLLMEIATTKVLVFLSSQLVLAAFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVIDGVELLVEEMNILTTVFLKLNNEKLYYPNSVLATKPISNYYRSPNMVDKVEFSVDFTTPAEKIGALKEKVKRHLERNPQYWHPNFGLVVKEIENVNNIKMGLFVTHTMNFQEFGEKTKRRSELVMEVKKIFEELNIRYNLLPQGVHLRHMEPDTSYLK 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07309 769 MobiDBLite consensus disorder prediction 41 78 - -
Mepo3g07309 769 Pfam Mechanosensitive ion channel 543 748 IPR006685 GO:0016020|GO:0055085
Mepo3g07309 769 SUPERFAMILY Sm-like ribonucleoproteins 592 651 IPR010920 -
Mepo3g07309 769 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 15 764 IPR016688 -
Mepo3g07309 769 PIRSF Memb_At2g17000 3 768 IPR016688 -
Mepo3g07309 769 FunFam Predicted mechanosensitive ion channel 602 651 - -
Mepo3g07309 769 Gene3D - 602 651 IPR023408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07309 Mepo-Chr3 86617112 86619999 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07309 44 758 Mechanosensitive Ion Channel Family AT5G12080 57.441 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07309 K22048 - gmx:100777617 1134.01