Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07306 ATGCATGGTAATAAGCATCAAGGTGGTGAAGTAAACATGATGGATAAGAAAAGAGAAGTGGTAGTGGCAATTTCAAATGTGGGTGAACTAGAGAGCCATGACCAAGATCATGATCATGGTTTGAAAGTGTTTGAATCTTATGAAAAAGAGCTTGCTTCAAACTCACCACCTTTAAACTGTGCTTCTCCTGAGATAAGGTTCACCCCAAGCTCAAATACACCCCCGCAAGTTCCTGCTACAAATGAAAACCTTACCACGAGAAAAACTCTCCGAAGATCAGTGTATTCTAAGCCCAAATCAAGGTTTGTAGAACAATCTTACCCTATTGATGAGACCCTTTTAGAAGAGAATGTTACTTGGTCAAATTCGCAAGAACAATCAGATGTTACTTCACCTTATAGGAACTCTTATTCACCTAGAACACCTTTAATGGCATCTCCAGGTTCTTCTTCTGGTGAGGATCCTGACGAAATCATTTATAGGAAAGTTGAATTTAGTAAAGCCCAGCATAAGAGACTAGCGACTAAGGTTTTGATCGAATTGTTCATGTTTGTGTGTGTCGTGGGTATCTTATTGGCTAGCTTAACAGTTGAGGAACTGAGAAGGATACATATTTGGAGTTTAGGGCTTTGGAGGTGGTGTATGCTTGTGATGGTGACATTTTTTGGCTTGTTAGTTACCAAATGGTTCATGCACATTGTCGTTTTCTTGATTGAAATGAACTTTTTGTTGAAGAAAAAGGTGCTTTATTTTGTCCATGGGTTGAAGCAATGTGTCCAGGTTTTCATTTGGATCAGTTTGGTTCTCCTTACATGGGTACTTTTTATCAATCACGAGGTCCAGCGATCTAAATTAGCCGCAAGGTTTTTGAATGATGTAACATGGACTCTTGTTTCCCTTCTCATTGGAGCATTTTTGTGGGTTATAAAGACATTGTTGCTATCGATTTTGGCATCAAATTTCCATGTCAAATCTTTCTTTGATCGAATTCAAGAATCGATCTTTCATCAATATGTTCTGCAGATGCTGTCCGGGCCTCCACTAATGGAAGAGGCTGAGAAAATCGGCAGATCTCAAAGTATTGGCCGTTTTAGTTTCGGGAGTAAAACTGTTAAAGGTTGCACAAAGAAAGAGGTTATTGATATGGCACAGCTTCACAACATGAAGCAAGAGAAAGTCTCCGCGTGGACCATGAAGATTTTGGTAGATGCAGTGATGAATTCAAGGCTGTCCACAATCTCTAATTCACTTGATGAAAGTTTTTATGATGTAAAAAATGAACGAACTGGTAAAGAAATTACTAATGAGATGGAAGCAACTGCTGCTGCCTATTATGTTTTCAAGAATGTTGCTGCTTCCCCCTGTTGCAAGGACATTGATGAGAATGAACTCCGTAGATTCATGATTAAGGAAGAAGTTCCTTTTGTATTTCCCCTGTTGGCCCAGGCAGATACAGGGCTAATTACCAAAAAATCTTTAGCAGATTGGGTGGTAAGGTTTATATGTTTGTTGAAAAGTTATCATCATCACAATGAAGGATTGAAATCCTGTTTCGACTATAATGTTTGTGTTTTTCAGTTAAAGGTTTATCAAGAACGTAAAGCACTGGCGCATGCCTTATGCGACACGAAAACAGCTGTTAAACAATTAAACAAGCTTGTGACAGGGGTCTTAGTAGTGGTGAGCATAGTAGTGTGGCTTCTTCTAATGGAAATTGCAACAACAAAAGTACTTGTATTCCTCTCATCACAGCTAGTACTAGCAGGGTTCATGTTTGGAAACACATGCAAGAATATATTTGAAGCCATCATCTTCGTGTTTGTAATGCATCCATTCGATGTTGGCGATCGATGTGTTGTAGATGGTGTTGAGCTATTGGTTGAAGAAATGAATATATTGACAACAGTATTCTTGAAGCTTAATAATGAAAAGGTGTATTATCCAAACTCTGTCCTCGCCACTAAACCAATTAGCAATTATTACAGAAGCCCAAATATGGTTGAAAGTATAGAGTTCTCGGTTGATTTTACGACACCAGCAGAGAAAATTGGAGCACTGAAAGAAAAAATAACGAGGTACTCGGAGAGGAATCCACAATATTGGCATCCTAATTTCAGCTTGGTAGTAATAGAGATTGAAAATGTAAATAAGATTAAGATGGGTCTTTATGTTACTCACACAATGAACTTTCAAGAGTTTGGGGAGAAGGTGAATCGGAAAAGTGAACTAGTGATGGAAGTTAAAAGAATATTTGAAGAGCTCAATATCAGATACAGCCTTCTTCCACAAGGTGTTCATCTCAGACACATAGAACCTGATACAAGTTCTCTCAAATGA 2337 0.3843 MHGNKHQGGEVNMMDKKREVVVAISNVGELESHDQDHDHGLKVFESYEKELASNSPPLNCASPEIRFTPSSNTPPQVPATNENLTTRKTLRRSVYSKPKSRFVEQSYPIDETLLEENVTWSNSQEQSDVTSPYRNSYSPRTPLMASPGSSSGEDPDEIIYRKVEFSKAQHKRLATKVLIELFMFVCVVGILLASLTVEELRRIHIWSLGLWRWCMLVMVTFFGLLVTKWFMHIVVFLIEMNFLLKKKVLYFVHGLKQCVQVFIWISLVLLTWVLFINHEVQRSKLAARFLNDVTWTLVSLLIGAFLWVIKTLLLSILASNFHVKSFFDRIQESIFHQYVLQMLSGPPLMEEAEKIGRSQSIGRFSFGSKTVKGCTKKEVIDMAQLHNMKQEKVSAWTMKILVDAVMNSRLSTISNSLDESFYDVKNERTGKEITNEMEATAAAYYVFKNVAASPCCKDIDENELRRFMIKEEVPFVFPLLAQADTGLITKKSLADWVVRFICLLKSYHHHNEGLKSCFDYNVCVFQLKVYQERKALAHALCDTKTAVKQLNKLVTGVLVVVSIVVWLLLMEIATTKVLVFLSSQLVLAGFMFGNTCKNIFEAIIFVFVMHPFDVGDRCVVDGVELLVEEMNILTTVFLKLNNEKVYYPNSVLATKPISNYYRSPNMVESIEFSVDFTTPAEKIGALKEKITRYSERNPQYWHPNFSLVVIEIENVNKIKMGLYVTHTMNFQEFGEKVNRKSELVMEVKRIFEELNIRYSLLPQGVHLRHIEPDTSSLK 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07306 778 Gene3D - 611 660 IPR023408 -
Mepo3g07306 778 PIRSF Memb_At2g17000 522 777 IPR016688 -
Mepo3g07306 778 PIRSF Memb_At2g17000 5 502 IPR016688 -
Mepo3g07306 778 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 17 774 IPR016688 -
Mepo3g07306 778 FunFam Predicted mechanosensitive ion channel 611 660 - -
Mepo3g07306 778 Pfam Mechanosensitive ion channel 552 757 IPR006685 GO:0016020|GO:0055085
Mepo3g07306 778 SUPERFAMILY Sm-like ribonucleoproteins 601 660 IPR010920 -
Mepo3g07306 778 MobiDBLite consensus disorder prediction 62 83 - -
Mepo3g07306 778 MobiDBLite consensus disorder prediction 120 148 - -
Mepo3g07306 778 MobiDBLite consensus disorder prediction 120 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07306 Mepo-Chr3 86587839 86591683 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07306 49 767 Mechanosensitive Ion Channel Family AT5G12080 54.620 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07306 K22048 - gmx:100803107 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07306 3 86587839 86591683 Mepo3g07306 3 86587839 86591683 ECH