Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07301 ATGAATCCAAGCATGGAAGATGAAGATCTCATGTTTGACTGCTTCGAAAATTCCCTTGACCCAAGTTTCTTCAATATGAGTAACCCAACACTAGCAGATTTATCCATCGATAAGAATAACAACAATGTGGGTCCCACTTCACTGTCCCAACAAACTCAGCATATCAATTTATCCATTAATAACAATAATGGACCCCACCAAAATCTTCATGGAGTTGGAATAGTTAGTAACTTTAATGATCTTTTTTCCACTCCACCATCTCAAGAAAATTACTATGGACATGGTGGTAGTAATAATAATGGAAATGATCCATTTAATTCCAATGTATTGCCACAACAGAATCATAGTGGTAATAATGATCCATTTGCTTACAATTTAGAATCACCAGAAAATGATCATCATATTCAACAACTGCATGGTGGTTGTAATGATCCGTATATGTACAATTTAGTACCACCAGAAAATCACCATGAATATATTCAACAAGGGCAGGGTGGTAATATTGATTCATTTTCGGACGTTATGTTGCAACAAAATCACCATGATGTACAACAACATGGACATGGACATGGTAGTGCAAATGAAACATTTTCTGTTCCAATGGTTCAAGATCAATATGATCAAACCAATAATAATTTTTCATTTGGAATAAATAGCCTTGAAGTGGATGGTAGTTCATCAAGAATGTATGAGAATCAACAACAAAGTATACCTGCAATTCAGATTCCCGTTTTGTTGAACCAAACCGAACTGCGAACACTTAATCAATGGCCACCCACAGAAACCCCATATTTTTGCAGTTGTTGTCAAGTTCTCAGAGAAATCATACACACTGATGGTATGCAATTTGAAAAGCTTGAGATTCATGGAAGGTTGGCGTTGATTACGCATGCAATTCACCATCAGATACCTGTTAATGGGGCCCCATCAGTTTATCAAATGATTGATTTTTGTGGGAAAAGCCTTGGTGAAATAAATAATTTTTTGGCACAGTACTGTGTGGAACGTCATTTAGCAGGATACATTCTTATGCAAGATCCAATGTCTGAATTTTATGAGACTCTTTGCACTGGATTGAATTGGTTTGATGATATTAATATGGAGGGTCTTATTCAAAATAATTCAGATGAAGTGGTGGAGCAAGAGCAAGAGCAAATGGGTGATAATGGAACGCTTAGGAACCTCTCAGAACAAAGGAGAAAATCTGCAAAACTGAAATTGAGTGACTTATGTGATTACTTTCATCTACCTATTGAGGAAGCAGCAGATCATGAGAAAGTGAAGTTATGTCCAACAGTTCTCAAGAAAACTTGTCGTAAAGCAGGGTTACCCAGATGGCCTCACAGAAAGGTGAAAAGCCTTTTGAAGCAGATCAAATTACTAGCAAATCAATGGGAAGGACAAGATCCAGAGGCAAGGGCAAGGACTGAAGGGGAAATTAAAAGCCTTCAAACCGAAATGATTCAGCACTGTGGTGGACATATACCAACCGCATTGTATAACATCGCCGCCTTCTCGCCACCACAGCCTCAGCAGCGATAG 1542 0.38 MNPSMEDEDLMFDCFENSLDPSFFNMSNPTLADLSIDKNNNNVGPTSLSQQTQHINLSINNNNGPHQNLHGVGIVSNFNDLFSTPPSQENYYGHGGSNNNGNDPFNSNVLPQQNHSGNNDPFAYNLESPENDHHIQQLHGGCNDPYMYNLVPPENHHEYIQQGQGGNIDSFSDVMLQQNHHDVQQHGHGHGSANETFSVPMVQDQYDQTNNNFSFGINSLEVDGSSSRMYENQQQSIPAIQIPVLLNQTELRTLNQWPPTETPYFCSCCQVLREIIHTDGMQFEKLEIHGRLALITHAIHHQIPVNGAPSVYQMIDFCGKSLGEINNFLAQYCVERHLAGYILMQDPMSEFYETLCTGLNWFDDINMEGLIQNNSDEVVEQEQEQMGDNGTLRNLSEQRRKSAKLKLSDLCDYFHLPIEEAADHEKVKLCPTVLKKTCRKAGLPRWPHRKVKSLLKQIKLLANQWEGQDPEARARTEGEIKSLQTEMIQHCGGHIPTALYNIAAFSPPQPQQR 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07301 513 MobiDBLite consensus disorder prediction 85 125 - -
Mepo3g07301 513 ProSiteProfiles RWP-RK domain profile. 388 474 IPR003035 -
Mepo3g07301 513 PANTHER PROTEIN RKD4 193 488 IPR044607 GO:0003700
Mepo3g07301 513 MobiDBLite consensus disorder prediction 85 128 - -
Mepo3g07301 513 Pfam RWP-RK domain 405 454 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07301 Mepo-Chr3 86538043 86540286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07301 364 491 AtRKD Transcription Factor Family AT5G66990 28.261 4.15e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Mepo3g07301 RWP-RK 2.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07301 - - tpra:123895752 549.28