LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo3g07291	ATGGAGGAGATGTCAGTTGCAGTGCCATTAATAGCAGGTATTAGTAATTCAGTGTGTGATAATCCAATCATAGCTACTCACATGGATGTTTCGGCAATGAAGATGATAGCCAATGCAGAGCTGATATCAAATGCCATAACTACGATATCCGCTGATACTACTTTTATTGGTTCTGATGAGGATCATATTGGTGACAATCTGGACGGTGAACTTGGTGTTTCAGCAGTCGCACCACCTTTGCATGGGAGAGAAGGGGAAATTCTTTTGTTGAATATGATATCTCAAAGTAGCGATGAACTTTTAGTCCCAGAAGTTGATGAGGATGATTCATTATCATTGGAAGGGGATCCAATTATTTATAGCACTCTATCAGTAACTAGCGAGAATGGTAGTGTTTGTGGAGATGAATTCTTCAGCGCTGAAGATAATTCGTATTTTAGGGCAAGGAGTTCGATGGACATAGATAAGAACATATCCTCTGTCGAAATTGTTGCTAAGGCTGCTGTTATCGACGAGTCAAATGTGGAGGCAGATATTATGAGTGAACCCCTTGCTGTAGCATTGAGCCTTGGAGAAGAAACAGGAGTTGGATCTGTACCATTGCCTACTACAGTTGTTCTTCATCAACTGCCTCTTAAAAAAGAGGTGAGTGGAACAGTTGGTCGTAGTGTTTTTGAACTGGATTGTACCCCACTTTGGGGATTTACATCTTTATGTGGAAAGAGACCTGAAATGGAAGATGCTGTTGCGATTGCACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAACAGCAAATATGATGGAATGAACAAGGATGGAATGAACAAGGATTTTAGTCAGCAAACAATTCATTACTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAATTATTGTCGAGATCGTATGCATTTGGCCTTAATTGAGGAGATAGAATTGTCCAAGGAAGATCTAATAATTGGAAGTACCAAGGATGATTGTCAAGATTTATGGAAAAAAGCTTTCACTAATTGTTTTTCAAAAGTTGACGATGAAGTTGGGGGAAAAGTTAACGGTGATCCTGTTGCACCAGAAACTGTTGGTTCCACTGCCGTTGTAGCTATTGTTTGTTCATCCCATATCATTGTTTCAAACTGTGGTGATTCGAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGCCTTTATCTGAGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAATGGAATGGTCATCGTGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATCAATTATTCCCGAACCAGAAGTTACATTCATCCCTCGCGCAAAAGATGATGAATGTCTCATTCTGGCTAGTGATGGCTTGTGGGATGTCATGACAAATGAAGAGGCATGCGACTTAGCTCGTAGGCGCATACTTCTTTGGCACAAGAAAAATGGCTCAGAGCTGTCCTTAGTAAGGGGAGAGGGAATCGATCTTGCCGCACAGGCAGCTGCAGAGTACCTATCAAACCGCGCTTTGCAGAAAGGAAGCAAAGATAACATCACTGTCGTCGTAGTAGATTTGAAAGCTCAGCGAAAATTTAAGACTAAAACATGA	1656	0.413	MEEMSVAVPLIAGISNSVCDNPIIATHMDVSAMKMIANAELISNAITTISADTTFIGSDEDHIGDNLDGELGVSAVAPPLHGREGEILLLNMISQSSDELLVPEVDEDDSLSLEGDPIIYSTLSVTSENGSVCGDEFFSAEDNSYFRARSSMDIDKNISSVEIVAKAAVIDESNVEADIMSEPLAVALSLGEETGVGSVPLPTTVVLHQLPLKKEVSGTVGRSVFELDCTPLWGFTSLCGKRPEMEDAVAIAPRMLKIPIQMLNGNSKYDGMNKDGMNKDFSQQTIHYFGVYDGHGGSQVANYCRDRMHLALIEEIELSKEDLIIGSTKDDCQDLWKKAFTNCFSKVDDEVGGKVNGDPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPMPLSEDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPEPEVTFIPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSLVRGEGIDLAAQAAAEYLSNRALQKGSKDNITVVVVDLKAQRKFKTKT	551

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Mepo3g07291	551	SMART	PP2C_4	222	539	IPR001932	-
Mepo3g07291	551	ProSiteProfiles	PPM-type phosphatase domain profile.	232	541	IPR001932	-
Mepo3g07291	551	ProSitePatterns	PPM-type phosphatase domain signature.	288	296	IPR000222	GO:0043169
Mepo3g07291	551	FunFam	Protein phosphatase 2C 16	220	551	-	-
Mepo3g07291	551	CDD	PP2Cc	234	541	IPR001932	-
Mepo3g07291	551	PANTHER	PROTEIN PHOSPHATASE	177	541	IPR015655	GO:0004722\|GO:0006470
Mepo3g07291	551	Gene3D	-	219	551	IPR036457	-
Mepo3g07291	551	Pfam	Protein phosphatase 2C	276	534	IPR001932	-
Mepo3g07291	551	SUPERFAMILY	PP2C-like	227	542	IPR036457	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo3g07291	Mepo-Chr3	86487078	86491250	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo3g07291	1	551	PP2C-type Phosphatase Gene Family	AT1G17550	48.319	7.84e-162	469

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo3g07291	K14497		-	gmx:102662702	763.066

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo3g07291	3	86487078	86491250	Mepo3g07291	3	86487078	86491250	ECH

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