Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07279 ATGAAGGGAATTAGAGTGAAAGAGGAAGAAATTTCAGCATACATAAATGTTGGTTCAACATCATGCAACTCTTCATCTTCCTCTTCAGGTTCAAATCTTACACCAAAACCAATGGAAGGGTTACATGAAATGGGTCCACCTCCATTTCTCACCAAAACCTTTGATGTTGTTGAAGATCCATCCACTGATTCGATTGTTTCGTGGAGCGGAGCTCGTAACAGTTTCGTTGTTTGGGATCTTCACAAATTCTCCACTTCTATTTTACCTCGTTACTTCAAACACAGTAATTTCTCTAGCTTCGTTCGACAACTCAATACCTATGGTTTTCGAAAAGTTGATCCGGATCGATGGGAGTTTGCGAACGAAGGGTTTTTAGCTGGGCAGAGGAACTTGTTGAAAACAATCAAGAGAAGAAGAAATGTGACACAATCACAAGCTATGCAGCAAGAAACCGTTGGTGCTTGTATTGAATTAGGAGAGTATGGTCTTGAAGGTGAGATTGAGAGGTTGAGAAGGGATAGGGCTGTTTTAATGGCTGAGATTGTGAAATTGAGACAGCAGCAGCATAATTCAAGGGAACAATTATCTGCTATGGAAGCTAGGTTGTTGATTACTGAGAAGAAACATCAACAGATGATGAATTTTCTTGCAAAAGCACTTAGTAATCAATCTTTTATACAGCAATTGGCACAGAATACAGAGTTGAAAGGCGTTGAAATGAAGCGAAAACGGAGGCTCACTGCCAGTTTGAGTTTGGAGAATTTGCAAAATGATTCTGGAGCTATAAGGACCGTGCCAATTGAGTCTGTGGTTGATTACTCTTGTCAAGAACAGCAAGAGGGTTTGACTACTATTGAGTCTGAGATGGAGACACTGTTAAGTGCTTATGATAATGAATCAAGCAGTGAAGTTAAGGACTACGCTGCATTGAGTTCTGTTCCAAGTTGTAATGAGAGTAATTTGGGTGACGCTGTGTGGGAGGATTTACTGAACCAAGAGTTGGTTGGTGGGAATCCAGAAGATGAAGTTGTGATTGGTGATTTTTCTCAAATTGACGTGCCGGTTGAGGATTTGGCAGGGAAGACTGATGATTGGACTGTGAATTTGCAGAACCTTGTTGATCAAATGGGTTTTGAACCTTAG 1143 0.4068 MKGIRVKEEEISAYINVGSTSCNSSSSSSGSNLTPKPMEGLHEMGPPPFLTKTFDVVEDPSTDSIVSWSGARNSFVVWDLHKFSTSILPRYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLAGQRNLLKTIKRRRNVTQSQAMQQETVGACIELGEYGLEGEIERLRRDRAVLMAEIVKLRQQQHNSREQLSAMEARLLITEKKHQQMMNFLAKALSNQSFIQQLAQNTELKGVEMKRKRRLTASLSLENLQNDSGAIRTVPIESVVDYSCQEQQEGLTTIESEMETLLSAYDNESSSEVKDYAALSSVPSCNESNLGDAVWEDLLNQELVGGNPEDEVVIGDFSQIDVPVEDLAGKTDDWTVNLQNLVDQMGFEP 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07279 380 ProSitePatterns HSF-type DNA-binding domain signature. 88 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 Pfam HSF-type DNA-binding 49 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 MobiDBLite consensus disorder prediction 19 35 - -
Mepo3g07279 380 SUPERFAMILY "Winged helix" DNA-binding domain 45 138 IPR036390 -
Mepo3g07279 380 Gene3D - 42 139 IPR036388 -
Mepo3g07279 380 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 35 273 IPR027725 -
Mepo3g07279 380 Coils Coil 167 201 - -
Mepo3g07279 380 FunFam Heat shock transcription factor 1 42 139 - -
Mepo3g07279 380 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Mepo3g07279 380 SMART hsfneu3 45 138 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 PRINTS Heat shock factor (HSF) domain signature 87 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 PRINTS Heat shock factor (HSF) domain signature 49 72 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 PRINTS Heat shock factor (HSF) domain signature 100 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07279 380 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07279 Mepo-Chr3 86384148 86387124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07279 35 378 HSF AT2G26150 51.841 2.24e-120 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo3g07279 HSF_DNA-bind 3e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07279 K09419 - gmx:100794605 469.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07279 3 86384148 86387124 Mepo3g07279 3 86384148 86387124 ECH