Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07266 ATGAGAATAGCTAGGAAATGCTCATATTGTGGAAACTTTGGTCACAATTCAAGGACTTGCAATAACAGTCTCAAAGAGCAATTTCATCTTTATTCTTCTTCACCTTCATATTTGCCCACAAAAAGGAGTTTCAGAAAGAACTACCTGCCATCATCGCGGACCTCTTTATCAATAGCCTCCTCCTTGCCTACCATGTTTGGTTCAAATGAAAATTCAGATAGTTGCGTAAGAAACGGGCATATATCAACAATCAGACCCAGTAAAAAAGGTATGCAGTGGACTGAGGAGGAGCACGAGATATTTCTTAGAGGACTTGAGAAGCTTGGGAAGGGTAACTGGAGAGGTATATCTAGAGATTTTGTAACAACAAACACACCAACCCAGGTTGCTAGTCATGCACAAAAACATTTTCTCCGTCAGTCTCAGAATTGCTTGATCAATAGAAGAAAACACCATCTTAACCTCCATAATGTGGGATGTGAAAAATCAGCAATAAATTTGACTCCAAATGATATCAGCTGCATAAGCCAACTAAGTGGAAGTAGAAATTTTCTTCCTCAGTGGCTTTCTCATCCTCAACATTCAATGATGAAATGGCCTAACTCTTCAACATCAACGAATTGTACTCCTCATAGTGCAGCACCTGATTTAGAACTCACACTTGCAACTCCCATGCCATTAGAGCTAACAGAAGCATGCTCTGTAGACCCCTTAAGCTAA 720 0.4 MRIARKCSYCGNFGHNSRTCNNSLKEQFHLYSSSPSYLPTKRSFRKNYLPSSRTSLSIASSLPTMFGSNENSDSCVRNGHISTIRPSKKGMQWTEEEHEIFLRGLEKLGKGNWRGISRDFVTTNTPTQVASHAQKHFLRQSQNCLINRRKHHLNLHNVGCEKSAINLTPNDISCISQLSGSRNFLPQWLSHPQHSMMKWPNSSTSTNCTPHSAAPDLELTLATPMPLELTEACSVDPLS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07266 239 CDD SANT 93 137 IPR001005 -
Mepo3g07266 239 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 140 IPR006447 GO:0003677
Mepo3g07266 239 Gene3D - 91 142 - -
Mepo3g07266 239 FunFam transcription factor MYB1R1 91 142 - -
Mepo3g07266 239 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
Mepo3g07266 239 ProSiteProfiles Myb-like domain profile. 85 137 IPR001005 -
Mepo3g07266 239 PANTHER TRANSCRIPTION FACTOR KUA1 5 190 - -
Mepo3g07266 239 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 85 141 IPR017930 -
Mepo3g07266 239 ProSiteProfiles SANT domain profile. 88 141 IPR017884 -
Mepo3g07266 239 SMART sant 89 139 IPR001005 -
Mepo3g07266 239 SUPERFAMILY Homeodomain-like 86 141 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07266 Mepo-Chr3 86272520 86273651 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo3g07266 Myb_DNA-binding 7.2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07266 - - mtr:11430636 438.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07266 3 86272520 86273651 Mepo3g07266 3 86272520 86273651 ECH