Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07259 ATGGTGATACAAATGGATAAAATTTCAATACTTGGGGATGCTGTTAACTACTTGAATGAGTTAAATGAACAAATTAATGATCTTCAAAGTGAGATAGCGTCAAGCTCTCCTGGATCATCTATGCCACCGCCTACAGGAACTCACATTATGACATCTACCATGTCAGCCCTTCCAGTTCAAATGAAAGAAAAGTTGTGTCCTAACAATGTGTCAGCTCTTAAAAACCAACCAACAAAGGTAGATGTTAGGGTAAGGGAAGGGGGAATTGTCAACATCCATATGTTCTGTGCCAACAAACCAGGTGTTTTGGCGTCGACTATGAAGGCATTGGATAGTCTTGGATTGGATGTTCACCAGGCTAACATAAGCTGTTTTAATGATTTCTCTCTAGATGTGTTCAAAGCTGAGCAACACAACAAAGACCAAGAGTTGACCCCCGAACAAATTAAAGCAATATTGTTGAAGGCATTGGGTTTTCATTGA 483 0.3975 MVIQMDKISILGDAVNYLNELNEQINDLQSEIASSSPGSSMPPPTGTHIMTSTMSALPVQMKEKLCPNNVSALKNQPTKVDVRVREGGIVNIHMFCANKPGVLASTMKALDSLGLDVHQANISCFNDFSLDVFKAEQHNKDQELTPEQIKAILLKALGFH 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07259 160 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 5 157 - -
Mepo3g07259 160 Coils Coil 11 31 - -
Mepo3g07259 160 CDD ACT_UUR-ACR-like 92 157 - -
Mepo3g07259 160 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 42 IPR036638 GO:0046983
Mepo3g07259 160 ProSiteProfiles ACT domain profile. 91 160 IPR002912 -
Mepo3g07259 160 SUPERFAMILY ACT-like 89 155 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07259 Mepo-Chr3 86218754 86222940 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07259 2 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.815 1.01e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07259 - - mtr:11429864 286.574