Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07247 ATGAACAGCATGAATTTTGATATTTCTCTTGGTCTTGGTCTTGGCCTCCATAAACAAAGACATAAACAAAGCAAGAAGATTAAGGAGGAAGAGGAGGACCCATGTAATAAGGCAGACCCATATTCTCTTACGTTAGGAGTTGGATCAGCTGCTGATAATATTGATGAGAAAAATATTCATCAAGTAGCTACTACTACAACCAAGACTGAATCGAATGAGTTTATTTATAATTTGCATCAACGTGCCTCTAATTCTACTAGCGTGATATCTTCATTTTCCAACTCCTCTAATAGCATCAAGAGGGAGAGAAATGATGAGGCAGAGAAGATTTCATTTGTTGATATTGATGATGTAAATGATAACTCCAGTAGAAAGAAACTTAGGCTTACCAAAGAACAATCCGCAGTCTTGGAGGACACCTTCAAAGATCATTCTACTCTCAATCCGAAGCAAAAGCAAGAATTGGCAAGCAAGCTGAATCTTCGGACAAGACAAGTGGAGGTGTGGTTTCAAAACAGGAGGGCAAGGACAAAGCTGAAACAAACGGAAGTGGAGTGTGAGGCACTGAAGCATTGTTATGAAACTCTAACAGAAGAGAACAAGAGGCTGGAAGAGGAGTTGAAAGAGCTCAAGTCCATGAAAACAACGGCACAGCCCGTAAATAATTACATGCAGCTTCCGGTTGCCAGTGTTACAGTTTGCCCTTCTTGTAAAAGAATTTGCACCGGCACCGGCACGGGCACCGGCGGTGAGAATGGCTCCTCTCACACCACGGCTTTGATTCTCTGCCCAAAGGCCCAAATTCACTTCTATGCAAATAATAATAACTATACGTTCGCCAAATCTTCTGCAACTATTGCTAGCTAG 867 0.4175 MNSMNFDISLGLGLGLHKQRHKQSKKIKEEEEDPCNKADPYSLTLGVGSAADNIDEKNIHQVATTTTKTESNEFIYNLHQRASNSTSVISSFSNSSNSIKRERNDEAEKISFVDIDDVNDNSSRKKLRLTKEQSAVLEDTFKDHSTLNPKQKQELASKLNLRTRQVEVWFQNRRARTKLKQTEVECEALKHCYETLTEENKRLEEELKELKSMKTTAQPVNNYMQLPVASVTVCPSCKRICTGTGTGTGGENGSSHTTALILCPKAQIHFYANNNNYTFAKSSATIAS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07247 288 MobiDBLite consensus disorder prediction 19 39 - -
Mepo3g07247 288 FunFam Homeobox-leucine zipper protein 18 109 185 - -
Mepo3g07247 288 ProSitePatterns 'Homeobox' domain signature. 155 178 IPR017970 GO:0000981|GO:0006355
Mepo3g07247 288 SUPERFAMILY Homeodomain-like 116 181 IPR009057 -
Mepo3g07247 288 Pfam Homeodomain 124 178 IPR001356 GO:0003677
Mepo3g07247 288 Coils Coil 179 216 - -
Mepo3g07247 288 SMART halz 180 223 IPR003106 GO:0006355|GO:0043565
Mepo3g07247 288 Pfam Homeobox associated leucine zipper 180 214 IPR003106 GO:0006355|GO:0043565
Mepo3g07247 288 SMART HOX_1 122 184 IPR001356 GO:0003677
Mepo3g07247 288 Gene3D - 117 187 - -
Mepo3g07247 288 CDD homeodomain 124 181 IPR001356 GO:0003677
Mepo3g07247 288 ProSiteProfiles 'Homeobox' domain profile. 120 180 IPR001356 GO:0003677
Mepo3g07247 288 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 10 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07247 Mepo-Chr3 86131611 86133059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07247 114 240 Homeobox Transcription Factor Family AT4G37790 68.504 3.70e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo3g07247 Homeodomain 3.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07247 K09338 - gmx:100790927 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07247 3 86131611 86133059 Mepo3g07247 3 86131611 86133059 ECH