Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07237 ATGAAGTCCATGAATGACAGTAGTAACTCTGATGACAACAATCATAACAACAATTGGTTAGGTTTTTCTCTCTCACCCCACATTTCTTCTTCTACTCCTCAACATCATCATCATTATCAACAAACTCAAACTTCTTCAGTTTCCAACACTGTTCCTACTTCTTTCTATTTTTCACCTTCTCCCTTCACCAACTCAACAATCTGTTATGGTGTTCCTGAAAATGGTAACAACTTTCATTCACCTAATTTGACTGTTATGCCTATCAAGTCAGATGGATCACTTTGTATCATGGAAGCTCTTGGTAGATCACAATCACAAGTGATGGTGCCATCTTCATCTCCTAAACTAGAGGATTTTCTTGGTGGTGCAACAATGGGTAGTGATGAATATGGTAGCCATGAAAGTGAGGCAATGGCTTTAAGCTTAGACAGCATCTACTATAATAACCAACAAAATGCAGATCCTCATCAAGTTAATAGAGACCATTCCCTTGACCTTCTTTCAGAATCTTTCAGACAACAAACATCACATCCATATTATGCAGCACTTGGTTTTCATGGAATGTTTCAAGCACCATTAGAGGTAGAATCAAAGGAAAACATAAACCATGTTGATGTTTCTGCTAGTTCCCAAATGCCTCAAAACTGGTATTCTGCTTCTCAGGCTTTAGAGCAGCAAGTGAACACTACTAGCATGGGGAATCATAATGGTGGAGTTGGTGGTGGTGGTTCTTCTTCTGTTGTTGGTACTGTAGGAAGTGGTGAGTTACAATCTTTAAGCCTTTCAATGAGCCCTGGTTCTCAATCTAGCTGTGTTACTGTTCCTAGACAAATCTCACCTTCTGGAACAGAATCAGTGACTATGGAGGCTAAAAAAAGAGGAGCTGCTAAGCTTGGTCAAAAGCAGCCTATTCATAGGAAATCTATTGACACTTTTGGACAGAGAACATCTCAGTATAGAGGTGTCACAAGGCATAGATGGACTGGTAGATATGAAGCACATTTATGGGATAACAGTTGCAAGAAGGAAGGACAAACAAGAAAAGGAAGACAAGTATATTTGGGTGGTTATGATATGGAAGAGAAAGCTGCAAGAGCTTATGATCAAGCAGCTCTTAAGTATTGGGGACCTTCAACACACATAAACTTCCCGCTAGAAAACTACCACACTCAACTTGAGGAAATGAAGAATATGACAAGGCAGGAATATGTTGCACATTTGAGAAGAAAAAGCAGTGGATTCTCAAGGGGTGCATCAATGTACAGAGGCGTGACAAGACATCACCAACATGGTAGGTGGCAAGCAAGGATTGGAAGAGTTGCTGGTAACAAGGATCTTTACCTTGGAACATTCAGCACTCAAGAGGAAGCAGCAGAAGCATATGATGTAGCAGCAATAAAATTCCGTGGAGCAAATGCTGTTACAAATTTTGACATATCTAAATATGATGTTGAAAGGATCATGGCTAGCAATACTCTTCTTTCTGGTCAGCATGCAAGGAGAATCAAAGATAAGGATCCACAGACCGAAGTTCATGAATATAATCATAGTACTAATGTGTCGAGCCAGTCCAATGGAGAAGCCGCTGAAGCGCAAAATGACAACGAAAATAATGATTCAAAATGGAAGATGGTTTTGCAGCAACAGCAATCAAATAGTTGTGACCAAAAAATCATTGTGAATTCTGATGGAAGTTACAAGAATTCTGATTTCTCTATGTCTTTACAAGACCTTGTTGGTATTAATTCAGTTAGTTTGGATGATAATACCAAAATAGGGACACATTTTTCAAATCCATCATCATTGGTGACAAGTTTAAGCAGTTCAAGAGAAGCTAGTCCTGATAAAACTGCTCCCTCACCACTCTTTCCAAAGCCTTCAATGGAATCAAAAATTGCTACTAATGTTGCTGTTAGTTCTTGGTTTCCTTCACACGTAGCTACACAAATGAGGCCAGCATCTTCAATCAATTTGTCTCACTTCCCAGTTTTTGCTGCATGGAATGAGACCTAG 2013 0.3944 MKSMNDSSNSDDNNHNNNWLGFSLSPHISSSTPQHHHHYQQTQTSSVSNTVPTSFYFSPSPFTNSTICYGVPENGNNFHSPNLTVMPIKSDGSLCIMEALGRSQSQVMVPSSSPKLEDFLGGATMGSDEYGSHESEAMALSLDSIYYNNQQNADPHQVNRDHSLDLLSESFRQQTSHPYYAALGFHGMFQAPLEVESKENINHVDVSASSQMPQNWYSASQALEQQVNTTSMGNHNGGVGGGGSSSVVGTVGSGELQSLSLSMSPGSQSSCVTVPRQISPSGTESVTMEAKKRGAAKLGQKQPIHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDQAALKYWGPSTHINFPLENYHTQLEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISKYDVERIMASNTLLSGQHARRIKDKDPQTEVHEYNHSTNVSSQSNGEAAEAQNDNENNDSKWKMVLQQQQSNSCDQKIIVNSDGSYKNSDFSMSLQDLVGINSVSLDDNTKIGTHFSNPSSLVTSLSSSREASPDKTAPSPLFPKPSMESKIATNVAVSSWFPSHVATQMRPASSINLSHFPVFAAWNET 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07237 670 FunFam AP2-like ethylene-responsive transcription factor 419 480 - -
Mepo3g07237 670 MobiDBLite consensus disorder prediction 594 626 - -
Mepo3g07237 670 MobiDBLite consensus disorder prediction 1 46 - -
Mepo3g07237 670 Pfam AP2 domain 318 376 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 Pfam AP2 domain 421 470 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 SUPERFAMILY DNA-binding domain 317 386 IPR016177 GO:0003677
Mepo3g07237 670 CDD AP2 419 480 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 FunFam AP2-like ethylene-responsive transcription factor ANT 317 386 - -
Mepo3g07237 670 ProSiteProfiles AP2/ERF domain profile. 420 478 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 ProSiteProfiles AP2/ERF domain profile. 318 384 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 MobiDBLite consensus disorder prediction 594 615 - -
Mepo3g07237 670 SMART rav1_2 420 484 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 SMART rav1_2 318 390 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 MobiDBLite consensus disorder prediction 232 251 - -
Mepo3g07237 670 PRINTS Ethylene responsive element binding protein signature 319 330 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 PRINTS Ethylene responsive element binding protein signature 460 480 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 MobiDBLite consensus disorder prediction 258 303 - -
Mepo3g07237 670 CDD AP2 317 384 IPR001471 GO:0003700|GO:0006355
Mepo3g07237 670 MobiDBLite consensus disorder prediction 258 286 - -
Mepo3g07237 670 SUPERFAMILY DNA-binding domain 419 480 IPR016177 GO:0003677
Mepo3g07237 670 Gene3D AP2/ERF domain 420 480 IPR036955 GO:0003700|GO:0006355
Mepo3g07237 670 Gene3D AP2/ERF domain 317 386 IPR036955 GO:0003700|GO:0006355
Mepo3g07237 670 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 108 553 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07237 Mepo-Chr3 86011840 86015686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07237 1 511 AP2-EREBP Transcription Factor Family AT4G37750 50.727 3.09e-157 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mepo3g07237 AP2 1.3e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07237 3 86011840 86015686 Mepo3g07237 3 86011840 86015686 ECH
Mepo4g00366 4 5516547 5520976 Mepo3g07237 3 86011840 86015686 PCT