Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07184 ATGGATGATTCCAGTGATCGGTTTCCCATCGGAATGCGTGTTCTCGCGGTCGACGATGATCCTTCTTCTCTCTTGCTTTTGGAAACTCTCCTCCGATCATGTCAATACCATGTAACCACAACTAGTGAAGCAATAACGGCATTGACTATGTTGCGAGAAAACATAGACAAGTTTGACCTGGTAATCGCTGATGTGCACCTGCCTGACATGGATGGACTTAAGCTGCTGGAACTTGTGGGACTTGAAATGGACCTTCCTATCATAATGTTGTCCGCATATAGTGATACGGAGCTGTTGATGAAGGCAATTTCCCACGGTGCCTGTGATTTTCTGCTGAAACCTGTGAGATTGGAGGAGGTAAGGAACATTTGGCAGCATGTAATTCGGAATGAGAAGTCCCAATTTGTTTGGTCTGTGGAGCTGCAACGCAAGTTTCTTGAAACTGTTAATCAGTTAGGAGTTGACAAGGCTGTACCCAAAAAGATTTTTGGTTTGATGAATGTTGAAAATATTACAAGAGAAGATGTGTCGACCCATCTCCAGAAGTATAGACTCTTTCTGAGAAGAATGGATGGTTCTGGACATTTTCACAATAATGCTTTCAGATCCGTTTCACCTAGTGTGATTATTGGTAATCTGAACACTCCAGCTGGTCTGAACGGGCACGGATTTTCTCCTTCCGGCCATAACTCCCGTTAA 699 0.4378 MDDSSDRFPIGMRVLAVDDDPSSLLLLETLLRSCQYHVTTTSEAITALTMLRENIDKFDLVIADVHLPDMDGLKLLELVGLEMDLPIIMLSAYSDTELLMKAISHGACDFLLKPVRLEEVRNIWQHVIRNEKSQFVWSVELQRKFLETVNQLGVDKAVPKKIFGLMNVENITREDVSTHLQKYRLFLRRMDGSGHFHNNAFRSVSPSVIIGNLNTPAGLNGHGFSPSGHNSR 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07184 232 FunFam Two-component response regulator 129 191 - -
Mepo3g07184 232 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 178 IPR045279 GO:0009736
Mepo3g07184 232 SMART REC_2 12 124 IPR001789 GO:0000160
Mepo3g07184 232 SUPERFAMILY CheY-like 11 133 IPR011006 -
Mepo3g07184 232 Gene3D - 10 132 - -
Mepo3g07184 232 NCBIfam myb-like DNA-binding domain, SHAQKYF class 132 186 IPR006447 GO:0003677
Mepo3g07184 232 CDD REC_typeB_ARR-like 14 128 - -
Mepo3g07184 232 ProSiteProfiles Response regulatory domain profile. 13 128 IPR001789 GO:0000160
Mepo3g07184 232 SUPERFAMILY Homeodomain-like 131 189 IPR009057 -
Mepo3g07184 232 Pfam Response regulator receiver domain 14 122 IPR001789 GO:0000160
Mepo3g07184 232 Gene3D - 133 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07184 Mepo-Chr3 85465358 85472566 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07184 6 190 Response Regulator Gene Family AT4G31920 51.948 1.73e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo3g07184 Response_reg 4.3e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07184 - K14491 mtr:25489924 272.322