Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07183 ATGAAGGCAGTTTGCCATGGTGCCTCTGAATTTCTGGTGAAACCTGTGAGATTAGAGGAGCTAAAGACCATTTGGCAGCATGTAATTCGGAAGAAGAAGGACAATGAGGACCTATCAGCTCAGAAGAAGTCCCAGTCTCTTTGGTCTGTAGAACTGCACCACAAATTTGTAGCTGCTGTTAATCAGTTAGGCATTGACAAGGCTGTACCCGAAAAGATTCTTGGTTTGATGAATGTTGAAAATATTACAGGGGATGAAGTGGCGAGCCATCTCCAGAAGTATAGACTTATTGACTATGTGAAGAAAGTTAGCTCTGTGGCAAGCCAACACGCTAGTAGTTTGGTGGCAACCTCAAGGAGTGCAGATCAGGATGAAGACAAAGATGAGGATAAAGAGAATGGTCATGACAATGAGGATCCATGA 423 0.435 MKAVCHGASEFLVKPVRLEELKTIWQHVIRKKKDNEDLSAQKKSQSLWSVELHHKFVAAVNQLGIDKAVPEKILGLMNVENITGDEVASHLQKYRLIDYVKKVSSVASQHASSLVATSRSADQDEDKDEDKENGHDNEDP 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07183 140 SUPERFAMILY CheY-like 2 46 IPR011006 -
Mepo3g07183 140 Gene3D - 39 102 - -
Mepo3g07183 140 MobiDBLite consensus disorder prediction 120 140 - -
Mepo3g07183 140 SUPERFAMILY Homeodomain-like 41 96 IPR009057 -
Mepo3g07183 140 MobiDBLite consensus disorder prediction 111 140 - -
Mepo3g07183 140 NCBIfam myb-like DNA-binding domain, SHAQKYF class 43 97 IPR006447 GO:0003677
Mepo3g07183 140 Pfam Myb-like DNA-binding domain 48 95 IPR001005 -
Mepo3g07183 140 ProSiteProfiles Response regulatory domain profile. 1 29 IPR001789 GO:0000160
Mepo3g07183 140 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 37 116 IPR044841 GO:0003700|GO:0006355
Mepo3g07183 140 FunFam Two-component response regulator 39 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07183 Mepo-Chr3 85457448 85458591 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07183 1 111 Response Regulator Gene Family AT2G25180 44.654 3.31e-33 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo3g07183 Myb_DNA-binding 6.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07183 - K14491 mtr:25489924 244.588