Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07181 ATGGTTGAGACTCGCTCTGCAAAGAGGAAAACCAACGAAACCCAAAATCACATGAATAAACGTGTCGTTTTGGGTGAACTTCCCAATTCAACAACCAATCTCACTGTTTCTCAATCGAAGAAGAACAATAACATTGTTTCAGAATCAACCACCCATGAAAACTTTGATGCTCCGGTTGTTTCCAGTGCTTATAACTATCTTCGATCCATTGAGATGGAGACAAATAGAAGACCAATGAAGGATTACATGGATATAGTACAGAGAGACATTGATCCAAAGATGAGAGGAATATTGATTGATTGGTTAGTAGAAGTTGCTGAAGAATTCAAGCTTCAGAATGATACACTTCATCTCGCTGTTTCATACATAGATAGGTTCCTATCTTTTTACCCTATCTGTAGGGTCAAGCTTCAATTGTTGGGTGTTGCATCCATGTACATTGCATCGAAGTATGAAGATATTAACCCACCCCATGTCGAAGAACTCTGCTTTATTACCGATAATACATATAACAGAGACGAGGTTTTAGAGATGGAAACTGACATACTCAAGACTCTAGATAATGATATGGGCGGTCCCACTGTTAAGACATTTTTAAGGAGGTTTAATGAAATTGTCTGTAAGAAGAAAAATGCTTCAAATTTGCAGTTTGAATTTCTAAGTAACTATCTTGCTGAGTTAAGTTTATTGGATTATGATTGTGTGAGGTTCTTGCCTTCTTTGGTGGCCGCATCGATCACATTGCTTGCTAGATTCATTGTTTGGCCCAAAACATATCCCTGGACATTAGCACTGCAAGAGTACTCTGGGTATAAACCAGCTGAGTTGAAAGAATGTGTTCTCATCTTACATGATCTGTATATGTCAAGACGGGAAGGGTCATTTGAAGCTACTCGGGAGAAATACAGGCAGTACAAGTATAAATACGTGGCTAACCTGCCTTCGCCTCCTCATTTACCAAGTTATCTGTTTTAA 975 0.3867 MVETRSAKRKTNETQNHMNKRVVLGELPNSTTNLTVSQSKKNNNIVSESTTHENFDAPVVSSAYNYLRSIEMETNRRPMKDYMDIVQRDIDPKMRGILIDWLVEVAEEFKLQNDTLHLAVSYIDRFLSFYPICRVKLQLLGVASMYIASKYEDINPPHVEELCFITDNTYNRDEVLEMETDILKTLDNDMGGPTVKTFLRRFNEIVCKKKNASNLQFEFLSNYLAELSLLDYDCVRFLPSLVAASITLLARFIVWPKTYPWTLALQEYSGYKPAELKECVLILHDLYMSRREGSFEATREKYRQYKYKYVANLPSPPHLPSYLF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07181 324 SMART cyclin_7 100 184 IPR013763 -
Mepo3g07181 324 SMART cyclin_7 197 285 IPR013763 -
Mepo3g07181 324 Pfam Cyclin, N-terminal domain 70 190 IPR006671 -
Mepo3g07181 324 Gene3D - 78 191 - -
Mepo3g07181 324 Gene3D - 64 312 - -
Mepo3g07181 324 PIRSF Cyclin_A_B_D_E 1 322 IPR046965 GO:0016538|GO:0044772
Mepo3g07181 324 Pfam Cyclin, C-terminal domain 193 315 IPR004367 -
Mepo3g07181 324 SUPERFAMILY Cyclin-like 193 318 IPR036915 -
Mepo3g07181 324 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Mepo3g07181 324 CDD CYCLIN_AtCycA-like_rpt2 193 307 - -
Mepo3g07181 324 SMART Cyclin_C_2 193 316 IPR004367 -
Mepo3g07181 324 FunFam Mitotic cyclin 6 78 178 - -
Mepo3g07181 324 FunFam Cyclin A1 180 312 - -
Mepo3g07181 324 SUPERFAMILY Cyclin-like 62 190 IPR036915 -
Mepo3g07181 324 PANTHER CYCLINS 43 304 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07181 Mepo-Chr3 85447665 85449904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07181 4 324 Core Cell Cycle Gene Families AT5G43080 48.387 1.43e-113 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07181 K06627 - gmx:100776007 388.267