Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07176 ATGGAGACTCGTGCTTCAAGGAAGAGGGCTAACGCTGAACCAATTGTTCTTAACAACAAAAAACAAAGGGTTGTTTTGGGCGCTCTTCCCAATTTACCAAATCTCAATGTTTCTCCTAAACCCCAGGCTTTGAAGAATCTTAAGCCAAAGAAATCTGATGCTGTTCGTTTGTTTCCTGCTTTCAATTTCGATAAGCCAGATTTCAGCAGAAACAATGCAAAATCTGATTATGAAGAGATTTTTGAGCCTTATGCAGCTGATATTTCCAACTATCTTCGCTCAATGGAGATTCAGAAAAAGAGAAGACCAATGGTTGGTTACATTGAGAAAGTTCAAAGAGGTGTTACTGCAAATATGAGAGGGATACTGGTGGATTGGTTGGTTGAGGTTGCTGAAGAATACAAGCTTCTCCCTCAAACCCTTCATCTTGCTGTTTCATACATTGACAGATTCCTATCTCTTGAATCTGTCAACAGATCTAAGCTTCAGTTGCTTGGTGTTTCATCCATGCTCATTGCATCAAAGTATGAAGAAATTACCCCACCAAAGGCTGTTGATTTTGTCCAAATTACTGATAACACCTATGAGCTGAAACAGGTTGTTAAGATGGAAGCTGACATTCTTAAGTCATTGAATTTTGAAATGGGCAACCCTCATGTTAACACCTTTCTCAAGGAGTTTATTGGGCCTGCTACTGAGGATCTAAAGACTTCAAAATTGCAAATGGAATTTCTGTGTAACTATCTTGCTGAGCTAAGCTTGATAGACTATGAATGTATACGATTCTTGCCTTCTATGGTGGCTGCATCTGTTATATTTCTTGCTAGATTCATAATCTGCCCTGGAGTACATCCTTGGACTTCATCATTGAGTGAAAGCTTGTTTTATAAATCTGCTGAGTTGGAGGAATGTGTTCTGATTTTACATGATTTGTATTTGGTAAGAAGGGCTGCATCATTGAAAGCTGTTAGGGAGAAATACAAGCAACACAAGTTCAAAAATGTGGCAAACCTTCCTTCATCACCAGAAATACCAAATCATTACTTCGAAGAAGAGTGA 1059 0.3872 METRASRKRANAEPIVLNNKKQRVVLGALPNLPNLNVSPKPQALKNLKPKKSDAVRLFPAFNFDKPDFSRNNAKSDYEEIFEPYAADISNYLRSMEIQKKRRPMVGYIEKVQRGVTANMRGILVDWLVEVAEEYKLLPQTLHLAVSYIDRFLSLESVNRSKLQLLGVSSMLIASKYEEITPPKAVDFVQITDNTYELKQVVKMEADILKSLNFEMGNPHVNTFLKEFIGPATEDLKTSKLQMEFLCNYLAELSLIDYECIRFLPSMVAASVIFLARFIICPGVHPWTSSLSESLFYKSAELEECVLILHDLYLVRRAASLKAVREKYKQHKFKNVANLPSSPEIPNHYFEEE 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07176 352 SMART cyclin_7 226 310 IPR013763 -
Mepo3g07176 352 SMART cyclin_7 125 209 IPR013763 -
Mepo3g07176 352 Pfam Cyclin, C-terminal domain 218 340 IPR004367 -
Mepo3g07176 352 SMART Cyclin_C_2 218 341 IPR004367 -
Mepo3g07176 352 ProSitePatterns Cyclins signature. 120 151 IPR006671 -
Mepo3g07176 352 SUPERFAMILY Cyclin-like 218 340 IPR036915 -
Mepo3g07176 352 FunFam G2/mitotic-specific cyclin 103 214 - -
Mepo3g07176 352 Gene3D - 87 337 - -
Mepo3g07176 352 PANTHER CYCLINS 70 329 IPR039361 -
Mepo3g07176 352 Pfam Cyclin, N-terminal domain 87 215 IPR006671 -
Mepo3g07176 352 FunFam Cyclin superfamily protein, putative 215 287 - -
Mepo3g07176 352 SUPERFAMILY Cyclin-like 82 215 IPR036915 -
Mepo3g07176 352 Gene3D - 101 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07176 Mepo-Chr3 85412137 85414296 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07176 3 351 Core Cell Cycle Gene Families AT5G43080 55.114 1.79e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07176 K06627 - gmx:100787417 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g00310 4 4776959 4780257 Mepo3g07176 3 85412137 85414296 PCT