Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07175 ATGGAGACTCGTGCATCAAAGAAGAGATCCAACACCAATCAACAACCTCCACATGTCATTGTTCCCAAAAGACAGAGGGTCGTTTTAGGTGAATTTTCCGATCTCAATCTTCCTGATTTTGATTACCAACCTACACAGAAACTCCAATGTAGGAAAAACCCTAACCTCAATAATTCAGCCACAACCCTTCCTTTGATTGATTCCAATTTGAATAAGCTGGTTCATACCAAATCCAATGCCAAACGTGATAATCAACAGATTATTCAGCCTTATGTATCTGATATCTCTGATTATCTTCGCACAATGGAGATGCAGAAAAAGAGAAGACCAATGGTTGGTTATCTTGAGAATGTTCAGAGAGGCATTACATCAAACATGAGGGGGACATTGGTTGATTGGTTAGTTGAGGTTGCAGATGAGTACAAGCTTCTTCCCGAGACGCTTCATCTGTCAGTTTCATACATTGACAGATTCCTATCTATTGAACCTGTCAGCCGATCTAAGCTTCAGTTGCTTGGTGTTTCATCCATGCTCATTGCATCAAAGTACGAAGAAATTACCCCACCAAAGGCAGTGGATTTCTGCCAAATTACTGATAACACCTATGACCTGGAAGAGGTATTAAAGATGGAAGCTGACATACTTAAGTCCCTGAACTTTGAAATGGGCAACCCTAATATCATAACATTTCTTAAGAGGTTTATTGGGATTGCTTGTGAGAATCGAAAGACTTCCAATTTGCAGTTTGAATATCTGTGCAGCTATCTTGCTGACTTAAGCTTGTTGGACTATGAGTGTATAAAATTCTTGCCTTCTGTTGTCGCTGCATCGGTTATATTTCTTGCCAGATTTATTATCCGGCCTGGAGTACATCCTTGGACTCCTTCCCTGTATGAATGCTTGGGTTACACATCGGCTAATTTAGAAGCATGTGTTATCATTTTACATGATTTGTATATGTCAAGAAAGGCAGGATCCTTCAAAGCTGTTCGTGACAAATACAAGCAGAACAAGTTAAAATGTGTGGCAAACCTGCCTTCATCGCCAGAGATACCGAATCATTACTTTGAAGAAGAGTTATGCAGTACAATTAACTTTGTGAATGAAGTTCATTGCTGA 1119 0.3968 METRASKKRSNTNQQPPHVIVPKRQRVVLGEFSDLNLPDFDYQPTQKLQCRKNPNLNNSATTLPLIDSNLNKLVHTKSNAKRDNQQIIQPYVSDISDYLRTMEMQKKRRPMVGYLENVQRGITSNMRGTLVDWLVEVADEYKLLPETLHLSVSYIDRFLSIEPVSRSKLQLLGVSSMLIASKYEEITPPKAVDFCQITDNTYDLEEVLKMEADILKSLNFEMGNPNIITFLKRFIGIACENRKTSNLQFEYLCSYLADLSLLDYECIKFLPSVVAASVIFLARFIIRPGVHPWTPSLYECLGYTSANLEACVIILHDLYMSRKAGSFKAVRDKYKQNKLKCVANLPSSPEIPNHYFEEELCSTINFVNEVHC 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07175 372 ProSitePatterns Cyclins signature. 127 158 IPR006671 -
Mepo3g07175 372 Pfam Cyclin, N-terminal domain 94 222 IPR006671 -
Mepo3g07175 372 SUPERFAMILY Cyclin-like 83 222 IPR036915 -
Mepo3g07175 372 FunFam G2/mitotic-specific cyclin 110 221 - -
Mepo3g07175 372 SMART cyclin_7 229 317 IPR013763 -
Mepo3g07175 372 SMART cyclin_7 132 216 IPR013763 -
Mepo3g07175 372 PIRSF Cyclin_A_B_D_E 2 358 IPR046965 GO:0016538|GO:0044772
Mepo3g07175 372 PANTHER CYCLINS 76 342 IPR039361 -
Mepo3g07175 372 Pfam Cyclin, C-terminal domain 225 347 IPR004367 -
Mepo3g07175 372 Gene3D - 108 223 - -
Mepo3g07175 372 SMART Cyclin_C_2 225 348 IPR004367 -
Mepo3g07175 372 FunFam Cyclin superfamily protein, putative 222 294 - -
Mepo3g07175 372 SUPERFAMILY Cyclin-like 225 348 IPR036915 -
Mepo3g07175 372 Gene3D - 94 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07175 Mepo-Chr3 85402901 85405494 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07175 3 358 Core Cell Cycle Gene Families AT5G43080 51.404 8.26e-125 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07175 K06627 - gmx:100786875 419.853