Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07159 ATGAACAACAAACATTCTCATCACTCATTTCACCTCTATTCAACAATGGCAAGAAAAACAAACCACTCAAACACTTTCATCATCTTCTCACTCTCATTCTTACTACTCACAACTACATTCTCCAACTCAACCAAACTCAACAAAACCAAACCCTCTCTCTCAGATCCTACATCTCTCATAGCATTCAAATTAAAAGCTGACCCAAACAACCACCTCAACTTCACTACCAAAATCCCATTCTGCAACTGGCAAGGCGTAGAATGCAACAACGAACACAGAGTCATTCGTCTCGTCCTCCGCAACTTAGATCTCGCCGGTGTTTTCCCTTCTCACACACTCTCCAATCTCGACCAACTCCGTGTACTCAGTTTGCAGAACAACTCCCTCACCGGAACAATACCCAATCTCTCCGGTCTCTTCAATCTCAAATCACTCTTTCTCGATAATAACTACTTCACTGGTTCAATCCCATTTTCTATATTCTCTCTTCACAGGCTTAAAACGTTGGATTTCTCTCATAACAATCTCTCTGGAAATATTCCTACACATTTTGTTACCGTTGATCGTCTTTACTATCTTCGTTTAAGCTTCAACTCTTTCAACGGTAGTATTCCTCCGTTTAATCAATCTTCTCTGAAAACTTTTGATGTTTCCGGTAATAATCTTTCCGGTGCAGTTCCGTTAACAACTGCGTTGTCGCGTTTTCAGCCGTCTTCTTTTGCTTTAAACCCTAATCTGTGTGGAGAGATTATTCGGAGAGAATGTCGTCCATCAACGCCGTTTTTTGCTCCGGCTACACCGCCGACGGTTGGACTTAACCAGAGTGCGAAGGTTCATGGATTAATCCGGCAGCCGTATGGAAAGAAACATGATCGGAGAGCGGTGATAATCGGATTTTCAACTGGAATCGTTTTTCTGTTACTTTCTCTAGCGTGTTTCGCGGTCGTGATCAAGACGCAGAGAAATAAAAAGGGAAAAGGAACTTCTGGATCGAGTGTGATGGCTTCCGACACGGCGGCGGCGACGGTGGAAGAAGCGGTGGTGATGCAAATGGAGCAAGAGAGAGAGTTAGAACAAAAAGTAAAAAGAGCGCAAGTTGCAAAGAGTGGGAGTTTAATATTCTGTGCGGGTGAGTCGCAGGTGTATACGCTGGACCAGTTGATGAAAGGTTCTGCGGAGCTATTAGGAAGAGGGTGTCTAGGAACAACTTATAAAGCGGTGCTTGATAACCGTTTGATTGTGACAGTGAAGCGTCTTGATTGTGGGAAAATGGGTGGGGATGTTAGTAAGGATGTTTTTGAGCGTCACATGGAATCAGTTGGTGGTCTTCGTCATCCAAATTTGGTTGCTGTTAGGGCTTATTTTCAGGCTAATCAAGAGAGGCTTATTATTTATGATTATCAGCCTAATGGAAGTCTCTTCTCCCTCATACACGGTTCCAGGTCAAGCAGGGCAAGGCCATTACACTGGACCTCATGCTTGAAAATAGCAGAGGACGTAGCACAAGGGCTTTCCTACATCCACCAGGCATGGAGACTGGTCCATGGCAATCTGAAGTCTACCAATGTTCTCCTAGGACCTGATTTCGAAGCTTGCGTCACAGACTACTGTCTGTCTGTTTTGGCCAACCCATCTACCTTTGATGAGGTTGGTGATTCTGCACCTTATAGAGCCCCGGAGACTCGCAATCCAAATCATCAGCCAACCCCCAAATCCGACGTTTTTGCATATGGTATTTTGTTACTAGAGCTTTTAACTGGGAAATATGCTTCTGAGCTTCCATTCATGGTTCCTGGTGATATGTCAAAATGGGTGAGATCTATCAGGGATGACAATGGGAGCGAAGATAACAGAATGGATATGCTTCTTCAGGTGGCTACAACTTGTAGCTTGATCTCTCCAGAGCAGAGGCCCACAATGTGGCAGGTCTTGAAGATGTTACAAGAAATCAAAGAGATTGTACTCTTGGAGGATAGTGAGTTGGACCTACGTAGTAGTAGTAATGCCATTGCCATGTCTTAG 2022 0.4421 MNNKHSHHSFHLYSTMARKTNHSNTFIIFSLSFLLLTTTFSNSTKLNKTKPSLSDPTSLIAFKLKADPNNHLNFTTKIPFCNWQGVECNNEHRVIRLVLRNLDLAGVFPSHTLSNLDQLRVLSLQNNSLTGTIPNLSGLFNLKSLFLDNNYFTGSIPFSIFSLHRLKTLDFSHNNLSGNIPTHFVTVDRLYYLRLSFNSFNGSIPPFNQSSLKTFDVSGNNLSGAVPLTTALSRFQPSSFALNPNLCGEIIRRECRPSTPFFAPATPPTVGLNQSAKVHGLIRQPYGKKHDRRAVIIGFSTGIVFLLLSLACFAVVIKTQRNKKGKGTSGSSVMASDTAAATVEEAVVMQMEQERELEQKVKRAQVAKSGSLIFCAGESQVYTLDQLMKGSAELLGRGCLGTTYKAVLDNRLIVTVKRLDCGKMGGDVSKDVFERHMESVGGLRHPNLVAVRAYFQANQERLIIYDYQPNGSLFSLIHGSRSSRARPLHWTSCLKIAEDVAQGLSYIHQAWRLVHGNLKSTNVLLGPDFEACVTDYCLSVLANPSTFDEVGDSAPYRAPETRNPNHQPTPKSDVFAYGILLLELLTGKYASELPFMVPGDMSKWVRSIRDDNGSEDNRMDMLLQVATTCSLISPEQRPTMWQVLKMLQEIKEIVLLEDSELDLRSSSNAIAMS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07159 673 Gene3D Transferase(Phosphotransferase) domain 1 469 663 - -
Mepo3g07159 673 FunFam Nuclear pore complex protein NUP107 53 206 - -
Mepo3g07159 673 SUPERFAMILY L domain-like 78 247 - -
Mepo3g07159 673 ProSiteProfiles Protein kinase domain profile. 389 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07159 673 ProSiteProfiles Leucine-rich repeat profile. 118 140 IPR001611 GO:0005515
Mepo3g07159 673 Pfam Protein kinase domain 393 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07159 673 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 33 651 IPR046959 -
Mepo3g07159 673 Pfam Leucine rich repeat 141 199 IPR001611 GO:0005515
Mepo3g07159 673 SUPERFAMILY Protein kinase-like (PK-like) 393 648 IPR011009 -
Mepo3g07159 673 Gene3D Ribonuclease Inhibitor 209 254 IPR032675 -
Mepo3g07159 673 Gene3D Phosphorylase Kinase; domain 1 353 467 - -
Mepo3g07159 673 Gene3D Ribonuclease Inhibitor 41 208 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07159 Mepo-Chr3 85265121 85268625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07159 26 668 Receptor kinase-like Gene Family AT5G43020 55.053 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo3g07159 Pkinase 8e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07159 - - cam:101511242 1085.86