Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07155 ATGGTACAGCAAAGCGAATCAACTAGGAGGATCATGGAAGAAGAAAGAGATTGTTGTTCAACAATAATAAGAAACATAGGAAGCAACAACAAACCTCAAGAGAAACACAACAAACAACAACTAGAGAAACCATACAGAGGAATAAGGAAGAGAAAGTGGGGTAAGTGGGTAGCAGAAATAAGAGAACCAAACAAAAGATCAAGAATCTGGTTAGGTTCTTATATCACTCCGGTAGCCGCTGCTCGTGCCTACGACACCGCCGTATTCTATCTAAGAGGTCCTACGGCTCGTCTTAATTTCCCCGAATTATTATTCCAAGACGACGAAGAAAACAACGACGACGGTTCTATTCAACAAGGTAACATGTCTGCTGATTTAATACGCAAAAAAGCCACCAAAGTCGGTGCTAGAGTTGATGCTCTTCAAACTGCTCTTCAAGCTTCTTCTCGTTCTGATTCCGATCAATTCAACTCTGATGTGAAACCGGATTTGAACAAGTTTCCAGAACCTGAAGATTATTAA 522 0.408 MVQQSESTRRIMEEERDCCSTIIRNIGSNNKPQEKHNKQQLEKPYRGIRKRKWGKWVAEIREPNKRSRIWLGSYITPVAAARAYDTAVFYLRGPTARLNFPELLFQDDEENNDDGSIQQGNMSADLIRKKATKVGARVDALQTALQASSRSDSDQFNSDVKPDLNKFPEPEDY 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07155 173 MobiDBLite consensus disorder prediction 145 173 - -
Mepo3g07155 173 PRINTS Ethylene responsive element binding protein signature 45 56 IPR001471 GO:0003700|GO:0006355
Mepo3g07155 173 PRINTS Ethylene responsive element binding protein signature 83 103 IPR001471 GO:0003700|GO:0006355
Mepo3g07155 173 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 30 172 - -
Mepo3g07155 173 Pfam AP2 domain 45 93 IPR001471 GO:0003700|GO:0006355
Mepo3g07155 173 FunFam Ethylene-responsive transcription factor 2 43 102 - -
Mepo3g07155 173 CDD AP2 45 103 IPR001471 GO:0003700|GO:0006355
Mepo3g07155 173 Gene3D AP2/ERF domain 44 102 IPR036955 GO:0003700|GO:0006355
Mepo3g07155 173 SUPERFAMILY DNA-binding domain 44 102 IPR016177 GO:0003677
Mepo3g07155 173 SMART rav1_2 44 107 IPR001471 GO:0003700|GO:0006355
Mepo3g07155 173 MobiDBLite consensus disorder prediction 156 173 - -
Mepo3g07155 173 ProSiteProfiles AP2/ERF domain profile. 44 101 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07155 Mepo-Chr3 85224684 85225533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07155 32 159 AP2-EREBP Transcription Factor Family AT1G46768 62.791 2.01e-49 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo3g07155 AP2 3.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07155 K09286 - gmx:100801528 214.157