Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07150 ATGATGACTTCCTCTAACGCTCAAAGAGTTTCAGAATGTTTTATCAAACCACTACACCCTATTGAAGATTCAAAGCAAATTTGTTATTTAACAGGCTGGGATATTGCTATGTCTTCTATGCACTACATCCAAAAAGGCCTATTATTCAAAAAACCAACAACTTCACCAAATAACCAACAAGATTTCATTTATAATCTATTGAAGAAGCTCAAACACTCCCTCTCTCAAGCTCTTTTCCATTTCTATCCTCTTTCTGGCCGTCTTGTCACCCGCAAAACTCAAGACCCTCCCTCTTATACCATTTTTGTTGACTGCAGTAACAATAACACCGGAGCTAGATTCATCTATGCAACCGCAGACGTGACCATATCTGATATCCTCTCACCGGTTGATGTTCCTCCAATTGTTGAGTCATTTTTTGATCTCAACAAAGCAAACAACCACAACGGTCACACCATGCCGTTGTTATCAATTCAAGCCACAGAGCTAGTGGATGGTGTTTTCATAGGTTGTTCCCTGAATCATTGTATAGGCGACGGTACCTCTTTCTGGAATTTTTTTAATATATGGTCCGAGATATTTCAATCTCAAAGTTGTGAAAATGAAAATGATGTTCCCTTTTCACGTCTACCTTTTCACGATCGTTGGTTTCTAAAAGGTTATGGTCCACCTATTAACCTTCCCTTCAAACATCACGAAGAGTTTATCAGCAGATATGAATCTCCCAACTTGAGAGATAGATTCTTCCATTTTACATCGGAGTCTATTGCAAAACTGAAAGCAAAGGCAAATAAGGAGTTTAACACAACAAAAATATCTTCGTTCCAGGCTTTATCAGCACATGTTTGGAGATGTGTCACACGTTCACGAGGACTAACAAATGATCAAAAAACCAGTTGTAAGTTAGCTATAAATAATCGACTAAGATTGGAACCACCTTTGCCACAAGATTATTTTGGAAACGCAGTTGATGTGGTTAGTGCAGAAACGACTGTGGAGGAATTGCTTCAGAATAACCTGGGATGGGCAGCATGGAAGGTTAGTGTGGCTGTGGTGAATCATGATGACAAAGAAGTGCGAAAGATGCTGAAAAAATGGTTAGAGTCTCCTGTTGTATACCAACTCGGTTATCACTTTGATCCCCAAAGTATCACAGTGTCAAGTTCACCAAGGTTCAATATGTATGGGAATGAATTTGGAATGGGTAAAGCGATGGCAGTTCTGAGTGGATATGCAAACAAATTTGATGGTAATGTATCATCATATCAAGGGTATGAGCATGGAAGCATAGATTTGGCGTTGACCCTTACACCTAATGCAATGAGGGCGTTGGAATTAGACGAGGAGTTCATGAATATTGTGGTTTGA 1368 0.394 MMTSSNAQRVSECFIKPLHPIEDSKQICYLTGWDIAMSSMHYIQKGLLFKKPTTSPNNQQDFIYNLLKKLKHSLSQALFHFYPLSGRLVTRKTQDPPSYTIFVDCSNNNTGARFIYATADVTISDILSPVDVPPIVESFFDLNKANNHNGHTMPLLSIQATELVDGVFIGCSLNHCIGDGTSFWNFFNIWSEIFQSQSCENENDVPFSRLPFHDRWFLKGYGPPINLPFKHHEEFISRYESPNLRDRFFHFTSESIAKLKAKANKEFNTTKISSFQALSAHVWRCVTRSRGLTNDQKTSCKLAINNRLRLEPPLPQDYFGNAVDVVSAETTVEELLQNNLGWAAWKVSVAVVNHDDKEVRKMLKKWLESPVVYQLGYHFDPQSITVSSSPRFNMYGNEFGMGKAMAVLSGYANKFDGNVSSYQGYEHGSIDLALTLTPNAMRALELDEEFMNIVV 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07150 455 Gene3D - 231 446 IPR023213 -
Mepo3g07150 455 FunFam Tryptamine hydroxycinnamoyl transferase 230 447 - -
Mepo3g07150 455 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 452 - -
Mepo3g07150 455 Pfam Transferase family 14 451 - -
Mepo3g07150 455 Gene3D - 9 225 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07150 Mepo-Chr3 85175335 85176889 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07150 70 445 Monolignol Biosynthesis Gene Families AT5G48930 29.082 1.54e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07150 - - lja:Lj1g3v1664450.1 673.7