Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07149 ATGAGTATTGAGATTATGATGACTTCCTCTATTGCTCAAAGAATTTCAGAATGTTTTATCAAACCACTACACCCTATTGAAGATTCAAAACAAATTTGTTATTTAACAGGCTGGGATATTGCTATGTCATCTATGCACTACATCCAAAAAGGTTTATTATTCAAAAAACCAACAACTTCACCAAATAACCAACAAGATTTCATTGAGAATCTATTGGAGAAGCTCAAACATTCCCTCTCTCATGCTCTTTTCCATTTCTATCCTCTTTCTGGCCGCCTTGTCACCCACAAAACTCAAGACCCTCCCTCTTATACCATTTTTGTTGATTGTAGTAACGATAACACTGGAGCAAGATTCATCTATGCAACTCTGGATGCAACAATATATGATATCGATAAAGCAATCAATCAGGATGCTCCACCTGTTGATCCTCCGCCAATTGTAGACTTGTTGTTTGATCTTGATAGAGCAATCAATCATGACGGTCACACCATGCCGTTGTTATCCATTCAAGTCACTGAGCTAGTGGATGGTGTTTTCATAGGTTGTTCAATGAACCACTGTATTGGTGATGGGACTTCTTTTTGGAATTTCTTCAATATATGGTCTGAAATATATCAAGCTCAAGCGAAAGGTTACGATGTTCTCATTTCGCATCAACCTTTTCATAATTGGTGGTTCCTAGAAGGTTACGGTCCACTAATTAATCTTCCATTCAAACATTTTGACGAGTTTACAAGCAGATTTGAAGCAGTACCCAAGTTGAGAGAGAAATTCTTTCATTTTAGTGCAGAGTCTATTGCAAAACTGAAAGCAAAGGCAAATAAAGAATCCAATACAAATAAAATATCTTCCTTCCAATCTTTATCGGCGTTTGTTTGGAGAAGTGTGACTCGTGCACGAAGACTAAAACATGATCAAATAACCAGTTGCAAGTTAGCCATAAACAATAGATCAAGAATCAAGCCACCTCTTCCGCAAGAGTACTTTGGAAACTCAGTTGATGTGGTGAGTACAGAAACGACTGTAGGCGAATTGCTTGAGAATGATTTAGGATGGGCAGCTTTGAAGGTGCATACACTTGTTGTGAATCATGACGATAGAGAGGTGAGACAGATGCTCAAAAGTTGGTTAGAGTCTCCAGTTGTCTACCAACTTGGTCGCCATTTTGATCCCTTCAGTGTGGTGATGTCAAGTTCACCTAGGTTCAATATGTATGGGAATGAATTTGGAATGGGAAAAGCGGTTGCAGTTCTTAGTGGATATGCAAACAAATTTGATGGCAATGTGACAGCCTATGAGGGATTTGAAGGAGGAGGAAGCATGGATTTGGCAGTGTCCCTTTTGCCTAATGCAATGAGTGCGCTAGAATCAGACGAGAATTTTATGAATGCAGTTTCTGTAGTCAATTTTTCTAATATTCTGTGA 1428 0.3866 MSIEIMMTSSIAQRISECFIKPLHPIEDSKQICYLTGWDIAMSSMHYIQKGLLFKKPTTSPNNQQDFIENLLEKLKHSLSHALFHFYPLSGRLVTHKTQDPPSYTIFVDCSNDNTGARFIYATLDATIYDIDKAINQDAPPVDPPPIVDLLFDLDRAINHDGHTMPLLSIQVTELVDGVFIGCSMNHCIGDGTSFWNFFNIWSEIYQAQAKGYDVLISHQPFHNWWFLEGYGPLINLPFKHFDEFTSRFEAVPKLREKFFHFSAESIAKLKAKANKESNTNKISSFQSLSAFVWRSVTRARRLKHDQITSCKLAINNRSRIKPPLPQEYFGNSVDVVSTETTVGELLENDLGWAALKVHTLVVNHDDREVRQMLKSWLESPVVYQLGRHFDPFSVVMSSSPRFNMYGNEFGMGKAVAVLSGYANKFDGNVTAYEGFEGGGSMDLAVSLLPNAMSALESDENFMNAVSVVNFSNIL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07149 475 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 15 464 - -
Mepo3g07149 475 FunFam Tryptamine hydroxycinnamoyl transferase 243 459 - -
Mepo3g07149 475 Pfam Transferase family 17 462 - -
Mepo3g07149 475 Gene3D - 251 459 IPR023213 -
Mepo3g07149 475 Gene3D - 14 250 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07149 Mepo-Chr3 85172226 85174036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07149 61 457 Monolignol Biosynthesis Gene Families AT5G48930 28.641 1.59e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07149 - - lja:Lj1g3v1664450.1 664.84