Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07147 ATGGCTCTTCTACTAGACAACTGTGAAGGCATTTTACTTTCCTTAGACTCACACAAATCAGTCCCAGCTCCATTCCTCACCAAAACATACCAACTTGTTGACGATCCAGCCACAGATCACATCGTTTCTTGGGGTGAAGATGACTCCACCTTCGTTGTTTGGCGTCCTCCAGAGTTTGCTAGAGACCTTCTCCCTAACTACTTCAAACACAACAACTTCTCTAGCTTCGTTCGCCAACTCAACACCTATGGTTTTAGAAAGATTGTACCTGACAGATGGGAGTTTGCAAATGAGTATTTCAAAAAAGGAGAAAAACATTTGCTTTGTGAGATTCATAGAAGAAAAACATCACAGCCACAACAAACAGGAATCAACAACATGAATCATCACCAGCAACATCACAATGTTTCACCTAGTTTCTTTCCATTTTCAAACACAAGAGTTAGCATTTCTCCATCCAATGATTACTCTGATGAACAACTCAACAACTGGTGTGACTCTCCACCATTAACTTCACCATCATTTGTTAATGGAGGAACAACAACAAACAACTATAACAGTTCTGTTACTGCTCTTTCTGAAGACAATGAAAGACTAAGAAGAAGTAACAACATGTTAATGTCTGAGTTAGCTCACATGAAGAAGCTTTACAATGATATTATCTACTTTGTTCAGAATCATGTTAAACCAGTAGCTCCAAGTAACACTTACTCTTCATCGTTTCTACTTCCACAAGCTTCAAATCAAACTCCTGTGAATGGTGTTGGTAATGTTTCAATGGTGCAAAAGCCAATGAACCAGCTTTTGGGCTATTACAATTCTAACCCTAAACATGTGACTCATCTTCAAACTCAAAATCAATCACATCATGGTATGAATGTGAACTCTCCAACAAACACATCAAGAAGCTCAATAACAATGGTTGAAGGGCTTAACAGTAATAACTGCAGCAAGACTAAGCTTTTTGGAGTATCACTTCAGTCCAAGAAAAGAGTGCACCCTGAATGTGGATCTAATAATCCAAATACTTTGGAAACCAACAAGGCTCGTTTGGTTTTGGAAAAAGATCATGATTTTGATTTGGGTTTGAATCTTATGCCTCCTTCCACTTGTTAG 1116 0.3844 MALLLDNCEGILLSLDSHKSVPAPFLTKTYQLVDDPATDHIVSWGEDDSTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEYFKKGEKHLLCEIHRRKTSQPQQTGINNMNHHQQHHNVSPSFFPFSNTRVSISPSNDYSDEQLNNWCDSPPLTSPSFVNGGTTTNNYNSSVTALSEDNERLRRSNNMLMSELAHMKKLYNDIIYFVQNHVKPVAPSNTYSSSFLLPQASNQTPVNGVGNVSMVQKPMNQLLGYYNSNPKHVTHLQTQNQSHHGMNVNSPTNTSRSSITMVEGLNSNNCSKTKLFGVSLQSKKRVHPECGSNNPNTLETNKARLVLEKDHDFDLGLNLMPPSTC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07147 371 Gene3D - 17 116 IPR036388 -
Mepo3g07147 371 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07147 371 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07147 371 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07147 371 FunFam Heat stress transcription factor B-4 17 115 - -
Mepo3g07147 371 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 290 IPR027725 -
Mepo3g07147 371 Coils Coil 189 209 - -
Mepo3g07147 371 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Mepo3g07147 371 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07147 371 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo3g07147 371 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07147 Mepo-Chr3 85138135 85139761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07147 1 370 HSF AT1G46264 55.216 9.28e-122 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo3g07147 HSF_DNA-bind 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07147 K09419 - gmx:100781389 560.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07147 3 85138135 85139761 Mepo3g07147 3 85138135 85139761 ECH