Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07146 ATGGACTGTAACCAGTTAAAGTCATCTTCATCATCATCAGAGGATCAAATTGACATGATGTTAATGATGATGATGCAACTCCCTGAATTTTCTTCATCTAACGGTAATAACAACACCATCAATCAATTTCCACCGTCAGATCAACAATTCTATGGCACTTCAAATGCTTCTAACAATACACGTCCTCTTGCAGATTTAATAGATAACCCTCCTAATCCAATACCATGGTCTTCATCTTCATCATTCACTCACTTACCCTCACAGTCCACCACAAACACAATCTCTTTCACCAATAACAACTCTACTACACCATTAATGTTCCAACAACAGCAACAAACAACACCGTTAATGTTTTCGAATTCGAGCAACGAGATTGCTACGAATGCGAACCATTACGGTACTGCGTCGCCATCAGAGAAACGAAACTCGATGGCGGCGATGAGGGAGATGATATTCAGAATAGCAGCTATGCAACCAATTTACATAGACCCAGAATCAGTAAAACCACCAAAGAGAAGAAACGTGAAGATTTCAAAAGATCCTCAGAGTATAGCAGCTAGACACAGAAGAGAAAGAATTAGCGAGAAAATAAGAATACTGCAAAGAATGGTTCCGGGTGGAACTAAAATGGATACTGCATCAATGTTAGATGAAGCTATTCATTATGTTAAGTTTCTCAAGACACAACTTAAGTCACTGCAGGAACGTGCTTCAGGAGCCAACAGTAACAGGACAGTTGCTGGTTCAGGATTAGGGTTCCCTGTTTCATTCCCTAAGCCTTACCAAGATCGTAATGTTGATCGTTATGGGTGA 813 0.401 MDCNQLKSSSSSSEDQIDMMLMMMMQLPEFSSSNGNNNTINQFPPSDQQFYGTSNASNNTRPLADLIDNPPNPIPWSSSSSFTHLPSQSTTNTISFTNNNSTTPLMFQQQQQTTPLMFSNSSNEIATNANHYGTASPSEKRNSMAAMREMIFRIAAMQPIYIDPESVKPPKRRNVKISKDPQSIAARHRRERISEKIRILQRMVPGGTKMDTASMLDEAIHYVKFLKTQLKSLQERASGANSNRTVAGSGLGFPVSFPKPYQDRNVDRYG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07146 270 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 237 IPR036638 GO:0046983
Mepo3g07146 270 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 8 241 IPR045843 GO:0003700|GO:0006355
Mepo3g07146 270 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 177 226 IPR011598 GO:0046983
Mepo3g07146 270 SMART finulus 183 232 IPR011598 GO:0046983
Mepo3g07146 270 FunFam BHLH transcription factor 180 244 - -
Mepo3g07146 270 MobiDBLite consensus disorder prediction 32 60 - -
Mepo3g07146 270 Coils Coil 216 243 - -
Mepo3g07146 270 CDD bHLH_AtIND_like 178 236 - -
Mepo3g07146 270 Gene3D - 176 246 IPR036638 GO:0046983
Mepo3g07146 270 Pfam Helix-loop-helix DNA-binding domain 184 226 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07146 Mepo-Chr3 85114523 85115335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07146 144 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G50330 79.091 1.66e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo3g07146 HLH 1.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07146 - - tpra:123913324 398.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07146 3 85114523 85115335 Mepo3g07146 3 85114523 85115335 ECH