Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07127 ATGGTGGCAAAAGCATCATCATCATCATCATACGAAGAGAGTCGTCGCAAAAGAATGGAAGAAAATCAAAAGAGAATGGAAGCTCTGAATCTTACCAAGCTCTCTCAATCTCTTCACAAATCATCTTCCCCCATTTCAAAACCCTCACCTTCCAAACCTCGCACTCCTATCAAGAAAGAGCTCGTTGTTGTTCGAAGATCGGGCCGTGTCGCCAATATGCCCGCTCCTGTTTACAAAGAAATTCTTATTGATTCCGTTAAGATACCTAGGAATAGAATTTCAAGATGTGGTGGATATGATAAGTACAGGGATTATTCGAAGCGAGTGTATGCGTCCGACGAAGCTAGAATGGAAGCAATGGAGAAGGCTGATAAGTTGCTCTCCGATTTAGATTCTGATCATCCAACTTTTGTCAAGTCAATGCTCCAATCTCATGTCACTGGTGGATTCTGGCTGGGCCTTCCAAATCATTTCTGCAGGAAAAACCTTCCAAAACGGGATGAAGTGATGACTTTAATTGATGAGGATGGGGATGAGTCTCCAACTACATATTTGGCTCACAAAACAGGACTTAGTGCTGGATGGAGAGGTTTCGCTATTGCTCATAACCTTGTTGATGGGGATGCTTTAATTTTTGAGTTAGTTAAACGCACTGCATTCAAGGTGTACATTATTAGAGTGAATGAGGGTAAAGAGGACGATTGA 705 0.4213 MVAKASSSSSYEESRRKRMEENQKRMEALNLTKLSQSLHKSSSPISKPSPSKPRTPIKKELVVVRRSGRVANMPAPVYKEILIDSVKIPRNRISRCGGYDKYRDYSKRVYASDEARMEAMEKADKLLSDLDSDHPTFVKSMLQSHVTGGFWLGLPNHFCRKNLPKRDEVMTLIDEDGDESPTTYLAHKTGLSAGWRGFAIAHNLVDGDALIFELVKRTAFKVYIIRVNEGKEDD 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07127 234 SMART B3_2 137 228 IPR003340 GO:0003677
Mepo3g07127 234 Pfam B3 DNA binding domain 137 226 IPR003340 GO:0003677
Mepo3g07127 234 MobiDBLite consensus disorder prediction 10 27 - -
Mepo3g07127 234 Gene3D - 112 230 IPR015300 -
Mepo3g07127 234 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 19 231 IPR044837 -
Mepo3g07127 234 CDD B3_DNA 135 226 IPR003340 GO:0003677
Mepo3g07127 234 ProSiteProfiles B3 DNA-binding domain profile. 137 228 IPR003340 GO:0003677
Mepo3g07127 234 SUPERFAMILY DNA-binding pseudobarrel domain 130 228 IPR015300 -
Mepo3g07127 234 MobiDBLite consensus disorder prediction 1 56 - -
Mepo3g07127 234 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07127 Mepo-Chr3 84932103 84936744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07127 7 234 B3 DNA Binding Superfamily AT3G19184 56.277 7.34e-76 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mepo3g07127 B3 1.1e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07127 - - gmx:100797091 283.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07127 3 84932103 84936744 Mepo3g07127 3 84932103 84936744 ECH