Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07106 ATGGATTTGAATATGAATATGAATTTTGAAGCTATGAATAGAAGCTCATCAACAACAACATCATCATCAGACTCATGTTCCTCAGAATCAAACCCAACAAACCAAAACAAACTAGACAGAATCAAAGGTCCATGGAGTGCAGAAGAAGACAGAATTTTAACCAGACTGGTTGAACAACATGGAGCAAGAAACTGGTCACTCATCAGCCGCTACATAAAAGGTCGGTCCGGCAAGTCATGTCGTCTCCGGTGGTGTAATCAGCTAAGTCCTACGGTGGAGCACCGTCCATTTTCTTCACAAGAAGATGAAACAATCATAGCGGCGCATGCTCAATATGGTAACCGTTGGGCTACCATTGCAAGGCTTTTACCCGGTAGAACTGATAATGCTGTCAAGAATCATTGGAACTCTACGCTTAAGCGTAGAGTGGGTTGTGGCGGTGGTCGTGGTATCTGTGGTGGTTCTGTTACGGTTGCTGGAGGTGTTAATGGTGGCAACGAGGGTGGAAGTTGTTCTGGTCCGTTTGCTTTTCCGGTGGAAGATGATCCGTTGACTGCGTTGACTCTTGCTCCACCGGGGAATGGTGTGGAAGATAGGGAGGAAATGGTTGCTGATCATAGGTTTCCTTCGCCGGAAAATGTTCCGACTGAGTTTTGGGATGTAATGAGAGGTGTGATTGCAAGAGAAGTTAGAGAATATGTTTCTTCTAATTTTTCTCATAACTCTAGTTTTCATTGA 738 0.4444 MDLNMNMNFEAMNRSSSTTTSSSDSCSSESNPTNQNKLDRIKGPWSAEEDRILTRLVEQHGARNWSLISRYIKGRSGKSCRLRWCNQLSPTVEHRPFSSQEDETIIAAHAQYGNRWATIARLLPGRTDNAVKNHWNSTLKRRVGCGGGRGICGGSVTVAGGVNGGNEGGSCSGPFAFPVEDDPLTALTLAPPGNGVEDREEMVADHRFPSPENVPTEFWDVMRGVIAREVREYVSSNFSHNSSFH 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07106 245 FunFam MYB transcription factor 42 93 - -
Mepo3g07106 245 Pfam Myb-like DNA-binding domain 45 103 - -
Mepo3g07106 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 92 IPR017930 -
Mepo3g07106 245 ProSiteProfiles Myb-like domain profile. 37 88 IPR001005 -
Mepo3g07106 245 PANTHER MYB PROTEIN-RELATED 42 202 - -
Mepo3g07106 245 SMART sant 41 90 IPR001005 -
Mepo3g07106 245 SMART sant 93 141 IPR001005 -
Mepo3g07106 245 Gene3D - 96 143 - -
Mepo3g07106 245 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 143 IPR017930 -
Mepo3g07106 245 CDD SANT 96 139 IPR001005 -
Mepo3g07106 245 MobiDBLite consensus disorder prediction 1 43 - -
Mepo3g07106 245 CDD SANT 44 86 IPR001005 -
Mepo3g07106 245 ProSiteProfiles Myb-like domain profile. 89 139 IPR001005 -
Mepo3g07106 245 SUPERFAMILY Homeodomain-like 39 135 IPR009057 -
Mepo3g07106 245 Gene3D - 41 93 - -
Mepo3g07106 245 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07106 Mepo-Chr3 84775539 84776647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07106 30 168 MYB Transcription Factor Family AT4G37260 66.906 5.23e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo3g07106 Myb_DNA-bind_6 1.3e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07106 - - zju:107420865 281.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07106 3 84775539 84776647 Mepo3g07106 3 84775539 84776647 ECH