Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07085 ATGGCACCAAGTTTTGATTGTGTTTCTAGCCTTCTTTGTACGGAGGAAGATAGCAGTGTTTTTGATGATGCTGAATATGTTGGTGGTGGTGGTTCGGTGGAGGTGTACGAGGATTCGTGGCGTCCTAGGAATGATCATCAGATGACTCAGCAACGTTATGATGGTGTTCCTGATGAGTTGCCATTGCAGAGTGAAGAGTGTTTGGTTCTGATGTTGGAAAAAGAGTGTCAGCAATGGCCTGGTGCTGATTATTTGAATAGGTTGAAGTTTGGAGATTTGGATTTTGAGGCTAGAAATGAAGTCATCGATTGGATTCAAAAGGTTCGAGCACATTTCGGTTTTGGTCCTCTTTGTGCTTATCTATCCATTAATTACATGGATCGGTTCCTTTCTATATATGAATTCCCTAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTAGCTTGCTTATCTTTGGCAGCTAAAGTAGAGGAAACTGCTGTTCCTCAGCCTCTTGATTTGCAGATTGGTGAATCCAAGTTTGTGTTTGAAGCTAAAACCATTCAGAGAATGGAGCTTCTAGTACTTAGCACATTGAAGTGGAGAATGCAAGCAATTACTCCATTCTCCTTCATTGAATGTTTCCTTTCTAAGATTAATGATGATGATAAGAGTTCATTAAGGTCTTCAATTTCGCAATCAACTCAGCTTATATCAAGCACCATCAAAGGTCTTGACTTCTTGGAATTCAAACCATCAGAGATTGCAGCAGCTGTAGCAACATGTGTTGTTGGGGAAACCCAAGCAATTGATAGTAGCAAATCAATTTCTACTCTGATTCAATACATAGAAAAGGAGAGATTATTGAAGTGTGTTGAAAAGGTCCAAGAGATGTCATTGAACAGTGTGTTCACTGCCAAGGATTCAAGTGCATCTTCTGTCCCTAGTGTGCCTCAAAGCCCAATGGGTGTGTTGGATACATTGTGCTTCAGCTACAAAAGTGATGACACCAATGCTGGTGGTGGTTCATGTTCTTCTTCACATAGTAGTAGCCCAGATGCTAAAAGGAGGAAGCTAAACAAAACCTGTGGATCAGAGCTTTTGTAG 1089 0.4105 MAPSFDCVSSLLCTEEDSSVFDDAEYVGGGGSVEVYEDSWRPRNDHQMTQQRYDGVPDELPLQSEECLVLMLEKECQQWPGADYLNRLKFGDLDFEARNEVIDWIQKVRAHFGFGPLCAYLSINYMDRFLSIYEFPKGRAWTMQLLAVACLSLAAKVEETAVPQPLDLQIGESKFVFEAKTIQRMELLVLSTLKWRMQAITPFSFIECFLSKINDDDKSSLRSSISQSTQLISSTIKGLDFLEFKPSEIAAAVATCVVGETQAIDSSKSISTLIQYIEKERLLKCVEKVQEMSLNSVFTAKDSSASSVPSVPQSPMGVLDTLCFSYKSDDTNAGGGSCSSSHSSSPDAKRRKLNKTCGSELL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07085 362 CDD CYCLIN_AtCycD-like_rpt1 97 195 - -
Mepo3g07085 362 PANTHER CYCLINS 64 291 IPR039361 -
Mepo3g07085 362 ProSitePatterns Cyclins signature. 98 129 IPR006671 -
Mepo3g07085 362 Gene3D - 81 198 - -
Mepo3g07085 362 MobiDBLite consensus disorder prediction 345 362 - -
Mepo3g07085 362 SMART cyclin_7 103 191 IPR013763 -
Mepo3g07085 362 SUPERFAMILY Cyclin-like 62 197 IPR036915 -
Mepo3g07085 362 CDD CYCLIN_AtCycD-like_rpt2 200 289 - -
Mepo3g07085 362 SUPERFAMILY Cyclin-like 182 293 IPR036915 -
Mepo3g07085 362 Gene3D - 71 288 - -
Mepo3g07085 362 Pfam Cyclin, N-terminal domain 70 197 IPR006671 -
Mepo3g07085 362 FunFam D2/4-type cyclin 81 193 - -
Mepo3g07085 362 FunFam D6-type cyclin 194 287 - -
Mepo3g07085 362 MobiDBLite consensus disorder prediction 332 362 - -
Mepo3g07085 362 Pfam Cyclin, C-terminal domain 200 297 IPR004367 -
Mepo3g07085 362 SMART Cyclin_C_2 200 325 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07085 Mepo-Chr3 84545657 84548586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07085 71 330 Core Cell Cycle Gene Families AT2G22490 48.496 1.30e-80 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07085 K18810 - gmx:547739 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07085 3 84545657 84548586 Mepo3g07085 3 84545657 84548586 ECH