Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07083 ATGGGTTATCTTTTATGCAATGCAGAATCTGCAATTGCTACCTGCGATCCACACTATTGGGATCTCAAAAAAAGAAACAAAACACTAACAACAAACACTATCAAAGAGTTTCTTTACACCCACCTTGTCACTGCCACAGATAGTTTCTCTGCCGATAACTACCTCGGCAAAGGTAGCCACGGCAGAGTTTACAAAGCAAAGTTAAACGGCGATAACGTTGTCGCTGTTAAAACAACAAAGCTAACTACAAAAATCAAACATAGTCACAACAATTGCACTGGTTGTGGTAATTGTACAAGTCCAGCAGAAAACGAGATCGAGATTCTTTCACAAGTTCCAAATCCTCGTCTCGTAAATCTCATAGGATACTGCACCGACCCAAACGGCAATAAATTAATTGTCGTCGAATACATGCCAAATGGTTCACTTCATGATTTATTACACTCTTCATCTAAACCTCCCGGTTGGACCAGACGTTTCCGGTTCGCATTACAAGTTGCAAAAGCGGTTCGAACCTTACACGCTTCAAATCCTCCGGTTATTCACCGTGATATTAAATCCTCCAACGTTTTAATCGATCAAGATTTCAAAGCAAGACTCGGTGATTTCGGTTTAGCGCTAAGAGGACACGTGGAAGACGTTCGTGTAAAGTGTACACCACCGGCGGGTACGTTAGGGTATCTTGATCCATGCTATCTTGCGCCTGAGGATCTTAGCGCCAAGAGTGATGTGTTCAGTTTTGGGATCTTGCTGTTGGAGATTATCAGTGGAAGAAATGCGATTGATGTTAATTATAGTCCTCCGTCGGTGGTTGATTGGGCGGTACCGTTGATTAGAAGAGGTGATTTCGTCGGGATCTGTGATCGGAGAATTGGTGCACCGTCGGATTTGGTGATGTTGCGGCAGATTGCAGTGATTGCGGCGAGATGCGTTAGATCGACGGCGGAGAAACGACCGGGGATGGTGGAGGTTGTTGAGTGTTTGAAATTGGCGAGGAAGAGGTTTCATTCGTCGCCGATTTGGTGTAGTTTGAGACGGCGCGTGACACGTGTAGAGAACGCGCAACCGTTGATGAGATGTGAAGATTACGATAATGATTATGATTATGATTTTCGTAATAATAATTATTATGATTGGGATGATGATGAAGATGATAACAAGAATGAGAATGTTGCGAAGATTGTTAAGAGTAGTGGGAGTAGTAGAAGGAGGAGTAAAGTATCAAGTGTAGAGTATGAGAGTAAACCGTTGAAGAAAGAAGCGAGATCTAAGCCGTCAAAGAAAGTAACGAGATCTAAAACCGTTGGATCTTCTTCTGGGTTTGTTAGTAGTTGCAGTAGAATGAGTGGGATTCAAATGGTTACAGAGAAAACGGGTGTAATGAAGTTGAAAAAGTCAAAGTCAATGGGAGTCTTGCAAAGTCCTGATTTGGGTGAGGGTGAGACAATGATAGCAATGTGGAAGTTGGTGATTAGAGATAATAAGAAAATGGAAAAGAAGATGCTAGAGAAACCTTTGGTTAATAAGCATGGTTGGGAATCAGAATAA 1548 0.4231 MGYLLCNAESAIATCDPHYWDLKKRNKTLTTNTIKEFLYTHLVTATDSFSADNYLGKGSHGRVYKAKLNGDNVVAVKTTKLTTKIKHSHNNCTGCGNCTSPAENEIEILSQVPNPRLVNLIGYCTDPNGNKLIVVEYMPNGSLHDLLHSSSKPPGWTRRFRFALQVAKAVRTLHASNPPVIHRDIKSSNVLIDQDFKARLGDFGLALRGHVEDVRVKCTPPAGTLGYLDPCYLAPEDLSAKSDVFSFGILLLEIISGRNAIDVNYSPPSVVDWAVPLIRRGDFVGICDRRIGAPSDLVMLRQIAVIAARCVRSTAEKRPGMVEVVECLKLARKRFHSSPIWCSLRRRVTRVENAQPLMRCEDYDNDYDYDFRNNNYYDWDDDEDDNKNENVAKIVKSSGSSRRRSKVSSVEYESKPLKKEARSKPSKKVTRSKTVGSSSGFVSSCSRMSGIQMVTEKTGVMKLKKSKSMGVLQSPDLGEGETMIAMWKLVIRDNKKMEKKMLEKPLVNKHGWESE 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07083 515 SMART serkin_6 49 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07083 515 SUPERFAMILY Protein kinase-like (PK-like) 28 328 IPR011009 -
Mepo3g07083 515 Gene3D Transferase(Phosphotransferase) domain 1 138 340 - -
Mepo3g07083 515 Pfam Protein tyrosine and serine/threonine kinase 52 328 IPR001245 GO:0004672|GO:0006468
Mepo3g07083 515 ProSiteProfiles Protein kinase domain profile. 49 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo3g07083 515 Gene3D Phosphorylase Kinase; domain 1 21 137 - -
Mepo3g07083 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 180 192 IPR008271 GO:0004672|GO:0006468
Mepo3g07083 515 MobiDBLite consensus disorder prediction 406 420 - -
Mepo3g07083 515 PANTHER OS01G0253100 PROTEIN 30 332 - -
Mepo3g07083 515 MobiDBLite consensus disorder prediction 395 441 - -
Mepo3g07083 515 ProSitePatterns Protein kinases ATP-binding region signature. 55 77 IPR017441 GO:0005524
Mepo3g07083 515 FunFam Serine/threonine-protein kinase-like protein 138 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07083 Mepo-Chr3 84515927 84517785 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07083 21 339 Receptor kinase-like Gene Family AT3G59420 39.815 2.60e-67 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mepo3g07083 PK_Tyr_Ser-Thr 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07083 - - cam:101503747 723.391