Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07072 ATGAAAGGAGAATACGTAGAGCAACATTCTTCAAATCCCAACAAAGGAAATGAAACACCACCACCTTCTTTACTATTCTCAAAGCTTCATCAATCACAATCACAATCCCCATTTCACCCTTTTCAACTTTCTCATCATGAATGTCAACCAATCGGTGAAGATGATAACAACAACACCAGCGGCGGCGCCACCGCTCAGAAACCTAACTCCTCCGGCGACGGTGCAACTATCGAGGTTTCTAGACGGCCGAGAGGACGTCCACCTGGCTCAAAAAACAAACCAAAACCACCTATTATCATCACAAGAGATCCAGAAACTGTGATGAGTCCTTTTATTCTAGAAGTTTCTGGTGGAAATGATGTTGTTGAAGCTATTTCAGAGTTTAGTCGTCGTAAGAATATTGGTTTATGTGTTTTAACTGGTTCAGGAACTGTTGCTAATGTTACTCTTCGTCAACCTTCAACTACACCAGGAACCACCGTTACTTTTCACGGCCGTTTTGATATTCTTTCTATAACCGCCACTTTTGTTCCTCAACAACACGGTGTTTCTCCGGCGATTCCGAGTAACTTCTCGATCTCGCTTGCTGGACCTCAAGGACAGATTGTTGGAGGAATTGTTGCTGGAAATTTGATAGCTGCTGGGACGGTGTTTGTGATAGCTTCTTCGTTTAATAATCCGTCGTATCATAGGTTACCGTTGGAAGAAGATGAAGGTGGAAACTCGGTGTCTGGTGGTGGTGGTGAAGGAAACTCGCAGAATGTTTCCGGTGCGGTGGATAGTGGACAAGGTCAGGGTGGTGAGTCATGTGGTATGTCGATGTACAACTGTCATTTGCCGTCGTCGGATGTGATTTGGGCTCCCTCTGCTAGACCACCACCACCACCTTACTGA 894 0.4519 MKGEYVEQHSSNPNKGNETPPPSLLFSKLHQSQSQSPFHPFQLSHHECQPIGEDDNNNTSGGATAQKPNSSGDGATIEVSRRPRGRPPGSKNKPKPPIIITRDPETVMSPFILEVSGGNDVVEAISEFSRRKNIGLCVLTGSGTVANVTLRQPSTTPGTTVTFHGRFDILSITATFVPQQHGVSPAIPSNFSISLAGPQGQIVGGIVAGNLIAAGTVFVIASSFNNPSYHRLPLEEDEGGNSVSGGGGEGNSQNVSGAVDSGQGQGGESCGMSMYNCHLPSSDVIWAPSARPPPPPY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07072 297 CDD DUF296 110 222 IPR005175 -
Mepo3g07072 297 MobiDBLite consensus disorder prediction 1 101 - -
Mepo3g07072 297 ProSiteProfiles PPC domain profile profile. 105 246 IPR005175 -
Mepo3g07072 297 MobiDBLite consensus disorder prediction 231 271 - -
Mepo3g07072 297 Gene3D - 109 241 - -
Mepo3g07072 297 MobiDBLite consensus disorder prediction 7 42 - -
Mepo3g07072 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 55 287 IPR014476 GO:0003680
Mepo3g07072 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 226 IPR005175 -
Mepo3g07072 297 MobiDBLite consensus disorder prediction 53 76 - -
Mepo3g07072 297 FunFam AT-hook motif nuclear-localized protein 109 244 - -
Mepo3g07072 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 107 237 - -
Mepo3g07072 297 MobiDBLite consensus disorder prediction 245 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07072 Mepo-Chr3 84404106 84405540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07072 73 295 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 65.066 3.56e-98 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07072 - - gmx:100815772 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07072 3 84404106 84405540 Mepo3g07072 3 84404106 84405540 ECH