Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo3g07066 ATGAACACAAGCAAAGCGGAAGCAGAACGGTTACTTGAAATCGGAGAAGAACTGTTGCAAAAACGAGATCTCAAAGGTTCAAGAGAAATTGCGAATCTTGTTCAAGAAACCGAACCTCTTCTTGAAGGTTCCGATCAGATCCTCGCTATTGTCGACGTTCTCGAAGCGGCGGAGAAGCCTCTCAATCTCAACAATCACCACCTCGATTGGTACGCTGTTCTTCAAATTGATCGCAATTCACAAGATCTCAATCGCATTAAGAAACAGTATCGTACTCTCGCTCTTCTTCTTCATCCTGATAAGAATCCGTTTTCTTACTCTGAACTCGCTTTCAAACTCGTTAAGGATGCTTGGGGTGTTTTGTCTGATCCCGTTCAAAAAGCACAGTATGATAAGGGCTTTGAATTTGAGCAATTGGGAAATGGAAATGGAAATGTGAATTTTTGGACTGCATGTCCTTATTGTTATCATATGTATGAATATCCTAGGGTTTATGAGGGTTGTTGTTTGATGTGTCAGAATTGTGAGAAATCGTTTCATGGTGTTTCGATTCCTTCTCTTCCGCCGATTGTTCCGGGACAAGAAGCTTATTATGTTTCTTGGGGAATGTTTCCGATGGGTTTTGTTCTTGAGAGTTTGGAAAATGCTGGTGCTGGTGCTGGTGATTCTGCTAGGAAGAAGCAATAG 687 0.4178 MNTSKAEAERLLEIGEELLQKRDLKGSREIANLVQETEPLLEGSDQILAIVDVLEAAEKPLNLNNHHLDWYAVLQIDRNSQDLNRIKKQYRTLALLLHPDKNPFSYSELAFKLVKDAWGVLSDPVQKAQYDKGFEFEQLGNGNGNVNFWTACPYCYHMYEYPRVYEGCCLMCQNCEKSFHGVSIPSLPPIVPGQEAYYVSWGMFPMGFVLESLENAGAGAGDSARKKQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo3g07066 228 PRINTS DnaJ domain signature 106 126 IPR001623 -
Mepo3g07066 228 PRINTS DnaJ domain signature 71 89 IPR001623 -
Mepo3g07066 228 PRINTS DnaJ domain signature 90 105 IPR001623 -
Mepo3g07066 228 ProSiteProfiles dnaJ domain profile. 69 134 IPR001623 -
Mepo3g07066 228 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 217 - -
Mepo3g07066 228 SMART dnaj_3 68 126 IPR001623 -
Mepo3g07066 228 Pfam DnaJ domain 69 131 IPR001623 -
Mepo3g07066 228 SUPERFAMILY Chaperone J-domain 67 167 IPR036869 -
Mepo3g07066 228 CDD DnaJ 69 123 IPR001623 -
Mepo3g07066 228 Gene3D DnaJ domain 55 147 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo3g07066 Mepo-Chr3 84315959 84317120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo3g07066 2 209 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 52.232 2.05e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo3g07066 - - tpra:123915791 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07066 3 84315959 84317120 Mepo3g07066 3 84315959 84317120 ECH
Mepo7g01624 7 25479818 25481589 Mepo3g07066 3 84315959 84317120 PCT